Callorhinchus milii (elephant shark): 103179991
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Entry
103179991 CDS
T03088
Symbol
dhx9
Name
(RefSeq) ATP-dependent RNA helicase A isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmk03041
]
103179991 (dhx9)
03012 Translation factors [BR:
cmk03012
]
103179991 (dhx9)
Enzymes [BR:
cmk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
103179991 (dhx9)
5.6.2.6 RNA 3'-5' helicase
103179991 (dhx9)
Spliceosome [BR:
cmk03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103179991 (dhx9)
Translation factors [BR:
cmk03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
103179991 (dhx9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
nSTAND3
ResIII
ATPase
AAA_19
Motif
Other DBs
NCBI-GeneID:
103179991
NCBI-ProteinID:
XP_007893758
UniProt:
A0A4W3KCP8
LinkDB
All DBs
Position
Unknown
AA seq
1406 aa
AA seq
DB search
MTDIKNFLYAWCGKRKVTPNYDIRAAGNKNRQKFVCEVRVDGFNYTGMGNSTSKKDAQTN
AARDFVNYLVRTGEMKAEEVPNTTQGVQPDAVDGADGSGEGGVPGTLPANVPCPPQIASE
ADSDFGMGKAGGFIGYWERGANLKEYYERRDEQEAQATLESEGLDLNAGLHGNWTLENAK
AQLNQYFQKEKIQADYKYAQVGPDHNRSFIAEMTLHVRQLGRKISAREHGSNKKLAAQSC
ALSLVRQLYHLGIIEAFTGHTKKKDTEKVAPYDLNLTSELERQLESTVHELGLELVLSPE
DPSNPVSLTVGKLAHFEPSLRQSQAGVVPWSPPQVNWNPWTSSNIDEGPLAYATSEQISA
DLKNELQYQLQNDTNLQQILNERELLPVKKFEDDILKAISFNSVIIIRGQTGCGKTTQVP
QFILDYFVKNNRGSDCNIVVTQPRRISAVSVAERVGCERGEELGTSCGYSVRFESVLPRP
HGSIMFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPDVRIILM
SATIDTTMFREYFFDCPIIEVFGRTFPVQEYFLEDCVQMTQFIPPPRDKKKKDRDEDGGE
DEEVNCNSICSDDYGPETKRVMAQMSEKETPFELIEALLKYIETLDGVDGAVLVFLPGWN
LIFAMQRHLESNPHFGSHRYRILPLHSQIPREEQRRVFDPVPPGVIKVILATNIAETSIT
INDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRRGRAGRVRPGFCYHLCSRAR
FERLETHMTPEIFRTPLHEVALSIKLLRLGGIGPFLAKAIEPPPLDAVIEAEHTLRELDA
LDINDELTPLGRILARLPIEPRLGKMMIMGCIFHVGDAVCTISAATCFPEPFINEGKRLG
YMHRNFAGTRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNIATLRMTWEAKVQLK
DILVNAGFPEESLMTQVFNNTGPDNNLDVVISLLCFGLYPNVCYHKEKRKILTTEGRNAL
IHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAVSAKGMTLVSPLQLLFYGSKKVMSDGTI
VLMDEWIKLRMSHTAAAAIVALRAAMEALVVEVAKDPEFIRQMDPTHERMLNMIRQISKP
GAAGINLLSNARFGDGPRPPKMARFDSQGFSVRGSGYRGGRGYGRGGGGYGGSRGYYSGG
GGSYQSSGYGGYGRGGGGGYSRSGGYASGGAGGYASGGAGGYASGGAGGYSSGGTGGSSS
GGGGGGYSSGGTEGYGSGGGAGGYSSGGGYGSGGGGYSSGGGYGSTGGGGGGYSGAGGGY
SGAGGGSYSSAGGKGYSSAAGGYTSAGAGGYSSAGAGGYSSAGAGGYTSGGAGGYTSGGG
AGGYTSGGAGSYGSSGGSYGGDRSGY
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgactgacataaaaaactttctctatgcttggtgtggaaaacgcaaggtcactccgaac
tatgatatccgtgcagctggtaacaagaaccgtcagaagttcgtctgtgaggtgcgagta
gatgggtttaattacactggaatgggaaactcgaccagtaagaaggatgctcaaactaat
gctgcaagagattttgttaattaccttgtgcgaactggggagatgaaagcagaagaggtt
cctaacacaactcagggtgttcaacctgatgccgttgatggtgccgatggaagcggagaa
ggtggtgtgccggggacattgccagcaaatgtaccatgtcctccacagatagctagcgaa
gcggactctgactttggaatgggcaaggcaggaggattcattggttattgggaacgtgga
gccaacctgaaggagtattatgagagaagggatgaacaggaagcccaagcaaccctggaa
tcagaaggcctggatttaaatgctggtcttcacggcaactggacccttgaaaacgccaaa
gctcaacttaaccagtacttccaaaaagagaagattcaagcagattataaatacgctcaa
gttggacctgaccacaacaggagttttattgcagagatgacgcttcatgtgaggcagctg
ggaagaaaaatcagtgcccgtgaacacggttcaaataagaaactggctgcacagtcatgt
gctctgtcattagtcaggcagctttaccatctagggatcattgaagctttcactggtcac
acaaagaagaaagacaccgaaaaggtggcgccatatgatttaaaccttacaagtgaattg
gagcgtcagcttgaaagtactgtgcacgaattggggttggagcttgtattatcaccagaa
gaccccagcaatccagtttcacttactgttggaaaacttgctcattttgagccgtctctt
cgccagagccaagcaggggttgtgccatggtcgcctccacaagtgaactggaatccatgg
accagcagcaacatagatgaaggacctcttgcatacgctacttcggagcaaatcagcgcc
gacctaaagaatgaactacaataccagctgcagaatgataccaacctgcaacaaatactg
aatgaaagagaattgttgccggtgaaaaaatttgaagacgatatcctcaaagctatcagc
ttcaattcagttatcatcattcgaggtcaaactgggtgtggtaaaacaactcaagttcct
caattcatcctcgattacttcgtcaaaaataaccgaggttctgactgtaacattgtagtc
acacagcctcgaaggattagtgctgtttcagttgcggagcgtgtaggatgtgaacgtgga
gaagagttgggtactagctgtggttacagtgttcgttttgaatctgtgctgccgagaccc
catggcagcataatgttctgtactgtaggtgtactcctgaggaaattggaagctggcatt
cggggcatcagccatgtaatagtggatgagatccatgagcgagatattaatacggatttc
cttcttgtggttctgagggatgttgtccaggcttatcctgatgtccgtatcattctcatg
tctgcaactattgataccaccatgttcagagaatattttttcgactgtccaataatagag
gtgtttggaagaacattccctgttcaagaatatttccttgaagactgcgtgcagatgact
cagttcatccctccgccaagggacaaaaagaaaaaggaccgagatgaggatggaggagaa
gatgaggaggtgaattgtaacagcatctgcagtgatgactatggtccggaaacgaagcgt
gttatggcccagatgagtgagaaggagacgccatttgagcttattgaagcattgctcaag
tacattgagacactggatggtgtggatggtgcagttctcgttttcttgccaggctggaac
ttgattttcgcaatgcagagacatctggaatcaaaccctcactttggcagccacaggtat
cggattttgccgttgcattcccagattccgagggaagaacagcgacgtgtgtttgatcca
gtgccaccaggcgtcataaaggttattttggcaacaaacattgcagaaaccagtatcacc
attaatgatgtggtttatgtcattgattcatgcaagcaaaaagtgaagcttttcacatct
cataacaacatgaccaactatgctacagtgtgggcttccaagaccaatctggaacagcga
cgaggcagagcaggacgtgtacggcctggcttctgctaccatctgtgcagcagggcacgc
tttgagagacttgaaacccacatgactccagagatattccgtacacctcttcatgaagtc
gctctgagcatcaagcttcttcgtctagggggaattggaccattcttggcaaaagctatt
gagcccccaccacttgatgcagttattgaggcagaacacactctgcgagaacttgatgcc
ctcgacatcaatgatgaactgacacctctgggccgaatcttggcaaggctcccaattgaa
ccacgtcttggcaagatgatgataatgggttgtatattccatgttggggatgctgtgtgc
accatatctgctgccacctgttttccagagccttttattaatgaaggtaaacgacttggt
tacatgcaccggaactttgcaggaacccgtttctcagatcatgtggctctgctttcagtt
ttccaggcctgggacgatgcaaggatgggaggtgaagaggcagaaataaggttttgtgaa
cataaaaggcttaacattgccaccttgagaatgacctgggaggctaaggtacaactaaaa
gatatcctggttaatgctggtttccctgaagagagcctgatgactcaagtatttaacaac
actggaccagataataatctggatgtggtgatctcactcctctgctttggtctttatccc
aatgtctgctatcacaaggagaagagaaaaattttaactacagaagggcgcaatgcactt
atccataaatcatctgtaaattgtcccttcagtagccaagatatgaagtacccttcccct
ttctttgtgtttggggagaagattcgcactcgggctgtgtctgcaaaagggatgactttg
gtgagtccactccagctcctattctatggctcaaagaaggtgatgtcagatggcacaatc
gttttgatggatgagtggataaagctgcggatgtctcacactgcggctgctgcaattgtt
gctttacgtgcagccatggaggcactagtagttgaagttgcaaaggatcctgaattcata
cggcaaatggatcccacacatgaacgcatgctgaacatgatccgtcagatttcaaagcct
ggagcagcaggcatcaacctcctgtcaaatgcaagatttggtgatggtcctcgtcctccc
aaaatggcacgatttgacagccaaggatttagcgtaagaggttctggttatagggggggg
agaggatatggaagaggtggaggaggatatggtggctctagaggttactacagtggtggc
ggtggcagctatcaaagtagtggttatggtggctatggcagaggaggaggaggtggctat
agcagaagtggtggctatgctagcggaggggcaggggggtatgctagcggaggggcaggg
ggttatgctagcggaggggcagggggttacagtagtggagggacaggtggttccagtagt
ggcggaggaggaggtggctacagtagtggagggacagagggttatggcagtggaggagga
gcggggggatacagtagtggagggggatacggtagcggaggagggggctacagtagtgga
ggaggatacggtagtacgggaggaggagggggtggctacagtggtgcaggagggggctac
agtggtgcaggaggagggagctacagtagtgcaggaggaaaaggctacagtagtgcagca
gggggctacactagtgcaggagcagggggctacagtagtgcaggagcagggggctacagt
agtgcaggagcagggggttatactagtggaggagcagggggttacactagtggaggagga
gcagggggttatactagtggaggagcaggtagctatggaagcagtggaggaagctatggg
ggagacagaagtggttattag
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integrated database retrieval system
