Callorhinchus milii (elephant shark): 103183362
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Entry
103183362 CDS
T03088
Name
(RefSeq) nuclear pore membrane glycoprotein 210-like
KO
K14314
nuclear pore complex protein Nup210
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103183362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103183362
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103183362
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_NUP210_3rd
Ig_NUP210_13th
Ig_NUP210_15th
Ig_NUP210_2nd
Ig_NUP210_5th
Ig_NUP210_1st
Ig_NUP210_8th
Ig_NUP210_7th
Ig_NUP210_4th
Ig_NUP210_16th
Ig_NUP210_9th
Ig_NUP210_6th
Ig_NUP210_14th
Big_2
NUP210_Ig
Motif
Other DBs
NCBI-GeneID:
103183362
NCBI-ProteinID:
XP_042194492
LinkDB
All DBs
Position
Unknown
AA seq
1881 aa
AA seq
DB search
MAAPSPQVSGLWYALLLLLLLSGCSLASKLNVPKVLLPYSPTIKVNFTLEADEGCYRWYS
TRPDVATIEPEYKNGTDCSQAALISARSTQPVRLTSIIIAEETVTGQILRCDTMVDVISQ
IEILSTTRELYVDDSLLKLTVRALDEEGNTFSSLEGFFFEWSIVKNEESDTLTESPSKIR
ILKFSEATYLPPAYIAKMETEGKQGDIILVSGLMTGTSTLKTRLQEAVYKTVPPAMIRLI
ILENIILSPSYDIYLLVGAFIRYRVTKIVNGKMTEIEMPSDQYKLELQNHVVDPDGEEGN
PVAELEPNSCTVTALQKGQASIVLIYRNIHMQTLSHLPNCTIYVVEAAFLGFSVLPGDRW
VLEMERKYEITVEVYDKKSNKVYLSDNLRISTTLPELHFSSLDFSKNGSYHYVDILLDGR
TVINASLFGVFGKNDTKLDLPVPITGHQDVIIYKPIILKPRILVFPWHPKPRSYRHIIQV
TGGSGNFTWSSSNESVAMVTVKGFIATGDNRGFSIIQARDVENPVHFGEMTVYVLRPVSI
EFVPSRVEIEIGQVLDLPIMVYGLLETDNMETVPVNNCTLMNIEVEVDKQGVFRTLEGRL
EPGDEYCTGIQVQGETQGHTLLTASSGFMQIHFSSSITIAAYHRLRAIDPVSVAVVTLTS
SKEMLFEGGPRPWVLEPSRFFADLSGEDWAKTIIKQLRAPLVKKKNQHGFRVICVGLGEQ
FLTFRVGNKPSLLNPNPAVEPVQVKFVCAMPTSLTLTPVYKPHQLSLPCPLLQHNKQLVP
VSFCRNSVLELTAYDQHRRKFDNFTSLLVNWKSSNNSLASFHVTKPMEMISKDDGSGQRR
QHGHRIVTVYRRKGTVSVSVCFVGYRKTVSPSTLNTVDAPFLPISTTIDLLLVDDVSIVP
GNLTIYNHPEILELIYLTEGSGYFFINTTNSEIVNSTYVEIKNYVQLKPLQPGVVTLKAY
DLCLTCVGPARAQIHVSDILDFELDLIHKVEIGKSVLVHVRILDFFKQPLLNRYFRYMDL
NLQAASPIVKLEGFSNLDQYAVSYIMKAVALGQTTLVVTVRDKNGRKLSSAPRQIEVFPP
FRLIPRTVTLIIGGMMQVMSEGGPQPQSNIYFSISNHSVAKVNDLGQLTALVVGTAKVTG
IVQAVDDDTGRVVVFSQDDVTVEVVQLKGIKIHAPVTRLKTGTQMPIYVMGLTSSQTPFS
FGNAVPGLTFHWITTKRDVIELVPRHLEITLQLSPEQNFAMVIHSIAQGKTGLKVTVKTL
NPSAGQFEGNVGSFYDEIQMMVFGKLQLLPLSFPAEEILMSPNTHLKLQTTRDGVAYVTY
EVQNCHINNSVIREDGNGILISGPTTGSSTLKVTALEYFGLNQTIVTGLRVTPVAYLRIQ
SSPALYVAKNEELTALPLGMTLTFTVHFYDLTGDKFHAQNTELYLAINRDDLLLIGPGTR
NNSYVAQAANVGLTLLGVWDKKHPGIADYIPIPVQYAIWPNVTTHVVLSDVICFTSPLVD
QEGEAGAWHLSTTDILQIDPTSGLVVTRSSGTATVYYDIPGVVRTYREITVTGVGKVTLF
FHNFTHIIGLPSSRVYSFFLTTMNRDSSLSGDCSSAHMKSMEMLKPETNIVCTVQFSNPM
LDILTLSVFTVEPAFVADKGQYSCIITIKELSDSVRRDLSTGDTFVSVKASVLGGHYTGQ
CGRTEISFIPGFYMNELVVILSSREPTANITVFGIYRVLIKLEVRAESSSIVVSEPIQSP
AVPNMVTYTLSTTNFSLFQQGLGLSNVTVVSTLTGQAVDVFVTVLRNGGGGGAGGDVPCE
ELGFFDKLVESYQVLMFTLFAVLATTAIIFIAYNAFLTRIQTIPVVYVSTPTQAVYNSRS
SPLVYDRARRRSLPSWMWSTR
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccccagtccccaggtctccggcctctggtacgccctcctcctcctcctcctc
ctctccggctgctcgctggcctccaagctcaatgtgcccaaagtgctgctgccttactcg
ccgaccatcaaagtcaacttcaccctggaggccgacgagggctgctacagatggtactca
acacgaccagatgtagcaaccattgaacctgagtataagaacggtaccgattgctcccaa
gcagctttgatatctgcccgatcaactcagcccgttcgcctgaccagtataattattgct
gaggagacagtgacgggccagatattgcgctgtgacacaatggtggacgttattagtcag
attgaaatcttatccacaacaagggagctgtacgtggatgactccttgttaaaactaaca
gtcagagctctagacgaagaaggtaacacttttagcagcctggaaggattctttttcgag
tggagcatagtgaagaacgaagaatcggatactctgaccgagtcaccgagtaaaattaga
attctgaagttttcagaagccacctatctgccacctgcgtatatagcaaaaatggagacc
gaaggcaaacagggagacatcattcttgtgtcggggttaatgactggcacttctacactg
aaaacccgactgcaagaagcagtatataagactgtccctcctgccatgatacgtcttatt
atcctggaaaacattattttgagtccgtcttatgatatttacctcctggtaggagccttc
attcgctacagagttaccaaaatagtgaacgggaaaatgacagaaattgagatgccctca
gatcagtacaaactggaactgcagaatcatgtggttgaccctgatggtgaagaggggaat
ccagttgcagagctggaacctaattcctgcaccgttacagcacttcagaaaggacaggct
agcatagtgcttatatacaggaacattcacatgcaaactctctctcatctgccgaactgc
acaatatatgtagtagaagctgcttttctgggtttttctgttctgcccggggacagatgg
gtgttggagatggaaaggaagtatgaaattactgtggaagtgtacgacaaaaaaagcaat
aaagtttatttgtctgataatttaagaatttccactacgctgccagaattgcactttagc
tccctggatttctctaaaaatggatcttaccattatgttgacattctgttggatggacgg
acagtaattaacgcttctctgtttggcgtgtttgggaagaatgacacaaaattggatcta
cctgttcccattaccggtcaccaagatgtgattatttataaaccaataatactgaagcca
cgtatcctcgtgttcccctggcaccccaaaccccgaagctaccgtcacattattcaggtt
accggtggaagcgggaattttacctggtcgtcatctaatgaatctgttgctatggtaaca
gtgaaaggctttatcgcaactggtgataacagaggcttcagcatcatacaggctagagat
gtagaaaatcctgttcactttggcgaaatgacagtatatgttctgaggccagtcagcatt
gagtttgtgccatccagagtagagattgagattggtcaggttcttgaccttcctatcatg
gtgtacgggctcctggaaacagacaacatggaaactgttcccgtcaataactgtacccta
atgaacatagaagtggaggtggacaagcaaggggtgttcagaacccttgaagggagacta
gagccaggtgatgaatactgtactggaatacaagttcagggcgagacacaaggtcacaca
ttgctgactgccagctctggatttatgcagatccactttagcagcagcatcactattgct
gcttatcatcggcttcgggctatagatcccgtttctgttgctgttgttacactgacgtct
tcaaaggaaatgctgtttgaaggaggacctagaccctgggtcctggaaccatcaaggttc
tttgcagacctgagcggtgaagattgggcaaagacgatcattaaacagctacgagctcca
ctggtcaaaaagaagaaccagcatggctttagagtcatctgcgtgggcctgggagagcag
tttttgacctttcgagtaggtaacaagccaagcttactgaatcccaaccctgctgtggag
cctgttcaagtaaagtttgtctgtgcgatgcctaccagtctcactttgactcctgtttac
aagccacatcaactcagtcttccgtgccctttactgcagcacaacaaacagttggtcccc
gtttctttctgcaggaacagtgtcctggagctgactgcatatgaccaacacagacggaaa
tttgacaacttcacctcactgctggtgaactggaaatcgtccaacaattctctagccagc
tttcatgtaaccaaacccatggaaatgatctcaaaagatgatggcagtggacagaggagg
caacacgggcatcggattgttacagtataccgcaggaaaggcacagtgtctgtctcagtg
tgttttgtgggttatcgaaagactgtttccccatcaacactaaacaccgttgatgctcca
tttctgcctatatcgaccaccatcgatttgttactggtggatgacgtatccatagtcccg
ggtaacctcacaatatacaatcaccctgaaattctggaattaatttatttaactgagggt
tctggatattttttcattaataccactaacagcgagatagtcaacagcacatatgtggag
ataaagaactatgttcagttaaagcctctgcagcctggtgttgtgacattgaaagcatat
gatctgtgtctgacctgcgtcggcccagctagagcacagatacacgtatcagacatatta
gattttgaactggaccttattcacaaggttgaaattggaaagtccgtcctagttcacgtg
aggatcctggattttttcaagcagccattgctgaacagatactttcgctacatggatcta
aacctccaagctgcttccccaattgtcaaattagagggattttccaatttggatcaatac
gctgtaagttacatcatgaaagctgtggctttggggcagaccactcttgtagtgactgtc
agggataaaaatggtcgcaagctgagttctgctccacgtcaaatagaagtgttcccaccc
ttcagactcatcccacggacagtgaccttaatcattggtggcatgatgcaggtgatgtcc
gaaggtggtccacagccacagtccaacatttatttttcgatcagcaaccacagcgtggcc
aaggtaaatgatctaggccagctgactgccttggtcgtggggacagccaaagtgacagga
atcgtccaggctgttgacgatgacacagggcgagtggttgtgttctcccaggatgatgtg
acagtggaagttgttcagctgaaagggataaaaatccatgctccagtcactagattgaag
acaggaactcagatgccaatatatgtgatgggactcacaagcagccaaaccccgttttcc
tttgggaatgcagtgccaggtctgacgtttcactggataacaacaaagcgggatgttatt
gagcttgtccccagacatttggagattaccttacagctctcaccagagcagaattttgca
atggtgatacacagcatagctcaagggaaaactggtttgaaagttaccgtaaagacactg
aatccatctgctggacagtttgaaggaaatgttggcagcttttatgatgaaatccagatg
atggtctttgggaagctccagctcttgcctctctctttcccagcagaggaaatattgatg
tcaccaaacacccacctaaaactgcagaccactagggatggtgtggcttacgtcacctat
gaagtgcaaaattgtcatattaataattccgtgattagggaggatgggaatgggatcctg
atatctggacccactactggttcttccacactgaaagtaaccgcacttgaatattttgga
ctcaaccaaaccattgtaactggattaagggtgactccagtggcttatctcagaattcaa
tccagccctgcgttatatgtagccaaaaacgaggagctaactgctcttcctcttggaatg
acattaacttttacagttcatttttatgaccttactggagacaagtttcatgcacagaac
acagagctgtacttagctataaacagggatgatctattgctgattggacctggtaccagg
aataattcttatgtggctcaggctgctaatgtgggattgactctgctgggagtttgggat
aagaagcacccaggaattgcagactacatcccgatacccgtgcaatatgcaatatggcct
aatgtaacaacgcacgtggtactcagtgatgtgatatgtttcaccagcccactggtggat
caggaaggtgaagctggagcctggcacttgtcaacaactgatatcctacagatcgatccc
acctcagggttggtagtgacgagaagttctgggacagccacagtctattatgatattcct
ggagttgtcagaacttacagagaaatcacagtcactggtgtgggaaaagtcacccttttc
tttcataactttacccatataattggtcttcctagttctcgcgtgtacagtttttttttg
acaactatgaacagagacagcagtctgagtggagactgcagttctgctcatatgaagtct
atggaaatgctaaaaccagaaacaaacatagtctgcactgtgcagtttagcaatcccatg
ttggacattctaactctctctgttttcactgtggaacctgcattcgttgccgataaaggg
cagtacagctgtatcatcacgataaaagagctctcagattctgtgcgcagagacttgagt
acaggagacacgtttgtatctgtgaaagcatctgtgcttggagggcattacacagggcaa
tgtggaagaacagagattagtttcatccctggattttatatgaacgagttagttgtgatt
ctcagcagcagggagcctaccgctaacatcactgtatttggcatatatagagtactgatt
aaactagaggtccgcgctgagtcgtcgagcattgtggtgagtgaaccgatccagtcgcct
gctgtccccaacatggtcacttacacattgagtaccaccaacttcagcctgtttcagcag
ggactggggttaagcaacgtcactgtagtcagcacactgaccggccaggcggtggacgtg
tttgtcacagtcctacggaacggaggaggcggtggagctggaggagatgtaccttgtgaa
gaattgggtttcttcgataagctggtggaatcctaccaggttttgatgttcacattattt
gcagtattggctacaactgcaatcatttttattgcgtataatgcctttttgacgaggata
cagactatcccagtagtgtatgtttctacaccaacacaggcagtttacaattctcgatct
tctccacttgtttatgatcgggcccgaaggcgttctctaccatcctggatgtggagcaca
cgttaa
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