Callorhinchus milii (elephant shark): 103183673
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Entry
103183673 CDS
T03088
Symbol
rapgef6
Name
(RefSeq) rap guanine nucleotide exchange factor 6 isoform X1
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04517
IgSF CAM signaling
cmk04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
103183673 (rapgef6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
103183673 (rapgef6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
PDZ
RA
cNMP_binding
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
103183673
NCBI-ProteinID:
XP_007899462
LinkDB
All DBs
Position
Unknown
AA seq
1552 aa
AA seq
DB search
MSSSVDPLFKQVLMKKSSERTRQDLEVIYSHLHGMDDLSNLREHQLRLMCTTVRYERHDA
NEVLFYPNSIATCWYILLSGCVFIKESMYLPRCSFGKQSAGSLRRSECIVLEPSEMILVE
NISESEEKNLRREVTHRQSRRRFRKINLKGERQTITDDVDSYPTDRPSLNSTYHMLPADL
SKMHLTDNLHSQGKHVPSSQSGCSFASDSGSSSLSDIYQATESEMGDVDLTGLTETAVDS
EEEEEDEEDIDRASDSLMGRDVVRECLEKDPTDRTDDDIEQLLEFMHQLPAFANMTMFVR
RELCSVMIFEVVEHAGAIIIDEGKELESWYVILNGSVEITDSSSRIEILCMGNSFGILPS
LEKQYMHGAVRTKTDDCQFVSIAQQDYCRILNQVEKNTHKVEEEGEIVMVKEHRELDRSG
TRKGHIVIKGTPDRLIRHLVEEHSIVDPTYIEDFLLTYRTFLSSPMEVGNKLLEWFNVES
LRDKVTRVVLLWVNNHFNDFEGDPAMTSFLEEFENKLEIAKMKGHLRLLNIACAAKAKWR
QITLLKPSRESPLFFNLLGGSERSFGIFVESVEQGSKAAETGLKRGDQIMEVNGQNFENI
QFTKALEILKNNTHLSITVKTNIFVFKELLNKLNQEKKNGVPHIPKIAEKKGNRYSHPDL
HGDMEHMFPPEKENKKMKANTVSGSRNRIRKILDKTRFSILPPKPFSDAGVSQSQDDSFV
GTRQLRHSVAIMPFPGTLSSSSPDLLQPATSMLDFTNPTDIPDQVIRVFKADQQSCYIII
SKDTTAKEVVTHSIHEFGLTAPPETYSLCEVSISSEGVIKQRRLPDQLSKLADRIQLNGR
YYLKNNMETETLCSDEDAQELLRESQITLLQLSTIEVATQLSMRDFELFRNIEPTEYIDD
LFKRESKSGNAHLKQFEDIINQETFWVATEILKEVIQLKRMKIIKHFVKVALHCRECKNF
NSMFAIISGLNLAPVARLRGTWEKLPNKYEKLLRDLQDLFDPSRNMAKYRNVLSSQSLQP
PIIPLFPVVKKDLTFLHEGNDSKVEGLANFEKLRMIAKEIRHVVRMTSVNMDPAIMFRHR
KKRWRSLGSLSQGSTNSNVLDSVQVGGHKKRVRRSSLLNAKKLYEDAQMARKVKQYLSNL
NVETDEEKIQVMSLQCETAYSTLSKNFGERRSYKGSDMSPVTMRSPCHQGKHQPQQRISQ
VLQVPTVALYPSRKKSQVKELPAVGSNSPQSTKKNLALSEDIPTDTCKKNAEDAMSTASS
QLSTPPVSPQSSPRKVVPRRASRCMRLNSGKLHVAFNLAPITRTDNFSDSSHSEISSRSS
IVSNCSVDSMCATTQDERCFHPSIDIPDTVEEVGGTNVPSAVNSHQSYTRESWASSTSSH
LGKFASDTGTIKRIGLHETKDGTPVYSAAISDSKPKVDTSYKAVTSSTEKGLIVYCVTAA
QRDGRYREPPPTPPGYVGIPIADVKEGGRHHPHLKPPDYNVALQRSRMVPQPCDPTRPAV
PIASQPTSSKQPRGPGHPQWRKLSETDPRLVQLNHQDLQGNEDDEDEQVSAV
NT seq
4659 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgtccgtggacccgctgttcaagcaggttttgatgaagaaaagttcggaaagg
actcgccaggatttagaagttatatactctcatctccatggcatggatgacttgtctaat
ttgagggaacatcagctcagattgatgtgcacaactgtgcgttatgaaagacatgatgca
aatgaagtcttgttctatcctaacagcattgccacttgctggtacatcctcctttcagga
tgtgtatttatcaaagagtcgatgtatcttccacgttgcagctttggcaagcagtctgca
ggaagcctgagacgaagtgaatgcatcgttttggagccttcagaaatgattctggtggaa
aatataagcgagagtgaggagaaaaatcttcggagggaagttacccaccgtcagtctcgt
cggcgattcaggaagatcaacttgaagggagagcggcaaacaatcacagacgatgtggat
tcctaccctacagacagaccatcactgaacagtacttatcacatgcttcctgcagatctt
tccaagatgcacctcacagacaatctacattcacagggtaaacatgtgccttccagccag
tccgggtgcagttttgccagtgactctgggagcagcagcctgtcggatatctatcaggcc
acagagagtgaaatgggggatgtagatctaactggactcacagagactgcagtcgactcg
gaggaagaggaggaagatgaagaggacattgaccgagcctctgattcactgatggggagg
gatgttgttcgcgagtgtctggagaaagaccctacagaccgtactgatgatgacattgag
caattgctcgagttcatgcatcagctccctgcctttgccaacatgaccatgtttgtcagg
agagaactgtgctcagtcatgatatttgaagtggttgaacacgcaggagcaataataatt
gacgaaggaaaagagctggagtcctggtatgtcattctaaatggctcggttgaaatcact
gattccagcagtaggattgaaatactttgcatgggaaacagttttggtattttgccctct
ttggagaaacagtacatgcatggagctgttaggaccaaaacagatgattgtcagtttgta
agcatagctcagcaggactattgccggatcttaaatcaagtcgagaagaatacccacaaa
gtggaggaggaaggggagattgtgatggtcaaagagcacagagaactggatcgcagtgga
acacgaaaagggcacatagtcataaagggaacaccagacagacttatcagacatttggtt
gaagaacattccattgtggatcccacatacatagaggacttcctgttaacatacaggaca
tttctgtcaagtccaatggaggttgggaacaaattgctggagtggtttaacgttgaaagc
ctcagggacaaggtcacgcgggttgtgctgctgtgggtgaacaaccactttaatgatttt
gaaggagatcctgccatgaccagttttctcgaggagtttgaaaataagttagaaattgcg
aaaatgaaaggacatctcaggttgcttaatattgcttgtgcggctaaagccaaatggagg
cagataactctgctgaaaccttcccgagagtcaccattgttctttaacctccttggtggc
agtgagagaagttttggtatcttcgtggaaagtgtggagcaaggcagcaaagctgccgag
accgggcttaaacgaggtgaccagattatggaagtgaatggacagaactttgagaatatc
caattcacgaaagccctagagattctgaagaacaacacgcatctgtccatcactgtgaag
acaaacatatttgtctttaaggagctgttaaacaaactgaatcaggagaaaaaaaatggg
gttcctcatattcccaaaatcgcagaaaaaaagggtaaccgttactcccatccagatttg
cacggggacatggagcacatgttccctcctgaaaaagaaaacaagaagatgaaggccaac
actgtgtcaggcagccgaaacaggatccggaaaatacttgacaagacacggtttagcatt
ttgccaccaaaaccattcagcgatgccggagtgagtcaatcgcaagacgatagtttcgtt
ggaacaagacagttaaggcacagtgttgccataatgcctttccctggaacactctcatca
agtagccctgacctgttgcaacctgctaccagcatgcttgatttcacaaatccaacagac
atacctgatcaagtcatccgagttttcaaggcagatcagcaaagctgttacatcattata
agcaaggataccactgcgaaagaggtggtaacccattccatccatgaatttggtttgact
gcaccccctgagacctactctctgtgtgaggtttccatcagctctgaaggtgtcattaag
caaaggcgacttcctgatcagctctcaaagctggctgaccggatccaactcaatggcagg
tattatctgaagaacaatatggagacagagactctttgctcagatgaagatgcccaggag
ctgttgcgggaaagtcagataactttgctacagctcagcaccattgaagtagccactcaa
ctctctatgcgagattttgaattgttccgtaacatagagcccactgagtatatagatgac
ctgttcaagcgagagtcaaaatctggaaatgctcacctcaagcagtttgaggacatcatc
aatcaggagaccttttgggtggctactgagattctgaaggaagttattcagttgaaaagg
atgaagataattaaacatttcgtcaaagttgccctgcactgtcgagagtgcaagaacttc
aactccatgtttgcaatcatcagtggcctaaaccttgcgccagttgcacgccttagaggc
acttgggaaaaactacccaacaagtatgagaagctacttcgggaccttcaagatctcttt
gacccttctcgaaatatggcaaaatatcgaaacgtactcagcagccagagtcttcagcca
ccaatcattccactgttccctgtagtcaaaaaagacctcacttttttgcacgaaggaaat
gattccaaggtggaaggtttggcaaactttgagaaactgcggatgattgctaaagagatt
cgacatgttgtccgaatgacatcagtgaacatggatccggcgattatgttccgacacagg
aagaagagatggaggagtttggggtctttgagtcagggcagcaccaactccaatgtgctg
gattcagtgcaagtcggagggcacaagaagagagtaagacgcagctccttactcaatgct
aagaagctctatgaggatgcacagatggctcggaaagtaaagcagtatctctcgaaccta
aacgtggagactgacgaagagaaaatccaagtaatgtcactgcagtgtgagaccgcctac
agtacactgagcaagaattttggagagaggcgatcgtataaaggttcagatatgtctcca
gtaactatgaggtcaccttgtcatcaaggaaagcaccaaccacagcaacggataagccaa
gtcttgcaggtgccaacggtggctttatacccatcccgcaagaaatcgcaagtcaaggaa
ctccctgcagttggctccaattccccacagtctacaaagaagaatctggccttgtctgag
gacataccaacagacacatgtaaaaaaaatgcagaagatgccatgtcaacagcatcatcg
caactctccacacctcccgtgtctcctcagagttctccccgaaaagtagtgccgaggaga
gcgagccgttgcatgagattgaatagtgggaagctgcatgttgctttcaacctagcaccc
attacaaggacggacaacttctccgactcaagccacagtgagatatcatcgcgctccagc
atcgtcagcaactgctctgttgattccatgtgtgccacgacgcaggatgagaggtgcttc
catccatcaattgatatcccggacacggtggaagaggttggaggaaccaatgtgccatca
gcggtaaattcccatcaatcctacacaagggaaagctgggcatcttcaacaagttctcat
ttgggcaagtttgcatcagacactggaaccataaaacggataggcttgcacgaaaccaaa
gatggaacacctgtgtacagcgcagctatctcagactctaagccaaaagttgacacctct
tacaaagctgttacttcaagcacagaaaaaggtcttatagtgtattgtgttactgcagca
caaagggacggtaggtatagagagccaccgcccaccccaccaggatacgtgggaattcca
atagcagatgttaaggaaggaggacgtcaccatccacacttaaaacctccagactataat
gtggctttgcaaaggtcgcggatggtaccacagccatgcgacccaacaagaccagcggtt
cccattgctagccaacctacttcaagcaagcaacctagagggccgggccatccacagtgg
cgtaaactctctgagaccgatcctagactagttcaacttaaccatcaagatcttcaaggt
aacgaagatgatgaagatgaacaggtttctgcggtctga
DBGET
integrated database retrieval system
