Callorhinchus milii (elephant shark): 103183817
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Entry
103183817 CDS
T03088
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103183817 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmk03041
]
103183817 (eftud2)
Spliceosome [BR:
cmk03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
103183817 (eftud2)
Complex C
U5 SnRNP specific factors
103183817 (eftud2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
103183817
NCBI-ProteinID:
XP_007899687
UniProt:
A0A4W3IEL9
LinkDB
All DBs
Position
Unknown
AA seq
969 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEEDGIDRDDDVDEADEDDDDEGGDQDDDQVGMEVVLHEDK
KYYPSAEEVYGPEVETIVQEEDTQPLTEPIIKPVKKKKFTLMEQELPDTVYDMEFLADLM
DNSELIRNITLCGHLHHGKTNFVDCLIEQTHPEIRKKDDRDLRYTDILFTEQERGVGIKS
TPVTMVLPDSKGKSYLFNIMDTPGHVNFSDEVTAGFRISDGMVLFIDAAEGVMLNTERLI
KHAVQEKLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLLSVYSTDENLIVSPL
LGNVCFASSQYSICFTLGSFAKIYADTYGDINYMEFAKRLWGDIYFNPKTRKFTKKAPTS
NSQRSFVEFVLEPVYKILSQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVCKKF
FGDFTGLVDMCVQHIPSPHNGGKSKIEHTYTGSLDVDLGEAMLECDPDGPLMCHTTKMYS
TEDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIEVNR
VPAGNWVLIEGVDQPIVKTATITEPRGNDEAQIFRPLKFNTASVIKIAVEPVNPSELPKM
LDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTFC
ETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYD
WDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCDEP
IRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADCV
SAVYTVLARRRGHVTQDAPIPGSPLYTIKAFVPAIDSFGFETDLRTHTQGQAFSLSVFHH
WQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLELAK
QDVVLNYPL
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggatacagacctgtacgatgaatttggcaattacattgggccagagttggactctgat
gaggaagatggtatagatcgagatgatgatgtggatgaggccgatgaagacgatgatgat
gaaggtggtgatcaggatgatgatcaagttggaatggaagttgtgcttcatgaggataaa
aaatattacccttcagcagaggaggtctatgggcctgaggtggaaacaatagtccaagag
gaagacacacaaccactgacagaacccatcatcaaacctgtcaagaaaaagaaatttact
ttgatggagcaggaattaccagacacagtgtatgatatggaatttttggcagatttaatg
gataattcggagcttattcggaacattactctgtgtggacatttacaccatggcaagaca
aattttgttgattgcttaattgaacaaacgcatccagagattcggaaaaaagatgaccgt
gatcttcgttatactgatatcctcttcacagaacaggagcgaggagtaggtataaagagc
acaccagtcacgatggtgcttccagactccaaaggcaaatcctatctctttaacatcatg
gatacaccaggacacgtaaacttttctgatgaagtgacagcaggttttcgcatctctgat
ggcatggtgttattcattgatgccgcagagggggtgatgctgaacactgagaggctgatt
aaacatgctgttcaggagaaactagctgtcacagtctgcatcaataaaatagataggctc
attctggagctgaaactacctccaacagacgcatattacaaactccgtcacatcgtggat
gaagtcaatgggttactgagtgtctattcaacggacgaaaacttgattgtgtctcctcta
ttgggcaatgtctgctttgctagctctcaatacagcatctgcttcactctgggatcattt
gccaagatctatgcagacacatatggggacattaactatatggagtttgcaaagcgacta
tggggtgacatttacttcaacccaaaaacacggaagtttacaaagaaggcaccgaccagc
aactcgcagagaagttttgtggagtttgtcctggaacctgtttataagatcctttctcag
gtggtgggtgatgtagacactactctgccacgcacattggatgagctgggaatccactta
actaaggaagaattaaagctcaacatcagacctttgctgcgactggtttgcaagaaattt
tttggagacttcacaggtctggtggacatgtgtgtgcagcatattccctccccacataat
ggtggcaagagtaagattgagcacacttacacgggcagcctggatgtagatcttggagag
gcaatgctggaatgcgatcctgacggtcctttgatgtgtcacaccacaaagatgtatagt
actgaggatggagtacagttccacgcatttggaagggtcctcagtggaactattcatgct
gggcagccagtgaaagtacttggcgagaactataccctggaggatgaggaggattctcag
atctgtacagtgggcaggctgtggatttcagttgcaaggtatcatatagaagttaacagg
gttcctgctggtaattgggtgctcatcgaaggagtagatcaacctatagtaaagacagcc
actatcacagaaccaagaggcaatgatgaggctcaaatcttcaggcctttaaagttcaat
acagcgtccgtcattaaaatagctgtggagcctgtcaatccatctgagcttccaaaaatg
ttggatggtttacgaaaggtcaacaaaagctacccttcactaactactaaggtagaagag
tctggtgagcacgtgattctaggaacaggagaactctatctggactgtgtgatgcatgac
cttcggaagatgtattcagaaatagatatcaaggtggcagacccggttgtaaccttctgt
gaaactgttgtggaaacctcatctctgaaatgttttgcagagacgcccaacaaaaagaat
aaaatcactatgattgcagaacctttggaaaaaggtttggcagaagacattgagaacgaa
gtggtccaaatcacctggaacaggaagaaactgggtgaattcttccagaccaagtacgat
tgggatttgttggccgctcgttccatttgggctttcggaccagatgctaccggccccaac
attttggtcgatgatactttgccgtcagaggtggacaaagctctcctgggttcagtgaag
gacagcattgtacagggattccagtgggggacacgagaaggtccactttgcgacgaaccg
attcggaatgtgaagttcaagattcttgatgcagtcatagctcaagaaccattgcacaga
ggtggagggcagattattcccacagcccgaagagttgtgtattcagctttcctgatggcc
acccctcgtctgatggaaccttattactttgtggaggtgcaggcacctgcagactgtgtt
tcagcagtctatacagtcttggctagacggagaggccacgttacacaggatgccccaatt
cccggttcccctctctatacaatcaaagcgtttgtaccagccattgactcctttggtttt
gagacggatctgaggacacacacacagggacaggctttttccctgtcagtcttccaccat
tggcagattgtacctggcgatcctttagacaagagcattgtcatcagacctctagagcca
cagccagcacctcacctggcgagggagttcatgattaaaacgaggaggcgaaagggcctt
agtgaagatgtcagtatcagcaaatttttcgatgatcctatgttgctggaactcgcaaag
caggatgtggttctcaattacccgctgtga
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integrated database retrieval system
