KEGG   Callorhinchus milii (elephant shark): 103183921
Entry
103183921         CDS       T03088                                 
Symbol
kdm6a
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase 6A
  KO
K11447  lysine-specific demethylase 6A [EC:1.14.11.68]
Organism
cmk  Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cmk03036]
    103183921 (kdm6a)
Enzymes [BR:cmk01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     103183921 (kdm6a)
Chromosome and associated proteins [BR:cmk03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    MLL3/MLL4 complex
     103183921 (kdm6a)
   Histone demethylases
    103183921 (kdm6a)
SSDB
Motif
Pfam: KDM6_C-hel JmjC KDM6_GATAL TPR_1 TPR_2 TPR_17 TPR_12 TPR_16 TPR_8 TPR_19 TPR_CcmH_CycH TPR_9 TPR_11 SNAP TPR_NPHP3 ARM_TT21_C PRIMA1 Nnf1 ANAPC3
Other DBs
NCBI-GeneID: 103183921
NCBI-ProteinID: XP_007899876
UniProt: A0A4W3IFH5
LinkDB
Position
Unknown
AA seq 1453 aa
MKSCGVSFGDEEKKMAAGKPSEIEDDFPTLTPQERDSVATLDSRLFGFLKLHEDGARTKA
LLIKAIHCFESVIKKCEGKVDPELFCQLGHFNLLLEDYPKALSAYQRYYSLQSDYWKNAA
FLYGLGIVYFHYNAFQWAIKAFQEVLYIDPSFSRANEIHLRLGLMFKVNTDYESSLKHFQ
LALIDSNPCTLSKAEIQFHVAHLYEIQRKYRAAKEAYEQLLQTENISTQVKANVLQQLGW
MHHTVEQLGDKTTKENYAIQCLQKSLEADPNSGQSWYFLGRCYSSIGKVQDAFLSYRHSI
DKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGTLYESCNQPQDA
IKCYINATRSKNCSNTSALTARIKYLQAQLCNLPQGSLQSKXKMLPSIEEAWSLPIPAEL
TSRQGAMNSAQQACKPHHHSNEPLVGLSQQQTAQQSLPLHMVPSNQLDDLSNPAKRKRMS
SPTKLNAPDVWSGGHTAPHHPVQQQVPSWYLTPQKLQLLEQLRANRKNLNQLQLQMLEQL
EEQFVSMRQHQQQLRQATIAQVRPTGIPNGPTLGSTLPTNSASGQQAHVALTRVPDRIVQ
SGIRPVAPGQLMANGPFPAEASRGPVTCSTTGMLGNTDTISIGNNHVTGSGSNGNVPYLQ
QNALTLPHNRTNLTSSAEEPWKKQLVNSTQGLNKGQSSHSAGPNGERPLSSTGPSQHFQS
AGTGIQNQVGHPAMPSNSLTTQGAALNHLSSYTATSGGQQGITLTKESKPSGKASSVPET
NRHSGGTPNSTASVEGLPNHVHQTIANAVSSSSHGESKSPGVLSSDNPQLSALLMGKPSN
NGGSVSCDKVNNIHPSVHTKTENSVASSPSSVVSTATPSPKSTEQTTANSVTSLNSPQSG
LGHTVNGKGVEDSQSPCKTDYPLTIHKSSPQLTPSASISIYPSSGEVLKACRNLGRNGLS
NSSILLVKCPPPRPAPPPYPPLPKDKLNPPTPSIYLENKRDAFFPPLHQFCTNPNNPVTV
IRGLAGALKLDLGLFSTKTLVEANNEHLVEVRTQLMQPTDENWDSTGSKKIWRCESSRSH
TTIAKYAQYQASSFQESLREENEKKSTHHKDQSDSESTSSDNGSRRRKGPFKTIKFGTNI
DLSDEKRWKSQLHELTKLPAFVRVVSAGNLLSHVGHTILGMNTVQLYMKVPGSRTPGHQE
NNNFCSVNINIGPGDCEWFAVPEVYWGVMNDFCEKNNINFLMGSWWPNLEDLYEANVPVY
RFIQRPGDLVWINAGTVHWVQAIGWCNNIAWNVGPLTASQYKLAVERYEWNKLQSVKSIV
PMIHLSWNMARNIKVSDPKLFEMIKYCLLRTLKQCQMLREALISASKEIVWHGRTKDEPA
HYCSICELEVFDLLFVTNESNSRKTYVVHCQDCARKGSGNLDNFVVLEQYKMEDLMQIYD
QFTLAPPLPSSSS
NT seq 4362 nt   +upstreamnt  +downstreamnt
atgaaatcctgtggagtatcattcggtgatgaggaaaagaaaatggcggcgggaaaaccg
agtgaaattgaggatgactttccaactctgacgcctcaggagagggactctgttgcaact
ctcgatagccgactgtttggatttctgaagcttcatgaagatggcgccagaacgaaggcc
ttgttaataaaggctattcactgctttgaatctgtaatcaagaaatgcgagggaaaagtt
gaccctgaattgttttgtcagcttggtcacttcaatctcttgttggaggattatccgaaa
gcattatctgcataccagaggtactacagtttacagtctgactactggaagaatgctgcc
tttttatatggccttggtattgtctacttccattataatgcatttcaatgggcaattaaa
gcatttcaagaggtgctttacattgatcctagcttctcgagggccaatgagattcactta
cgtcttgggttgatgtttaaagtgaatacggactacgagtcaagtcttaagcattttcag
ttggcattgatcgactccaacccttgcactctgtccaaagcagaaattcagttccatgtt
gctcacttgtatgaaatccagagaaagtatcgtgctgctaaggaagcctacgagcagctt
ttgcagacggagaatatttccacacaagtgaaagcaaatgtactgcagcagttaggctgg
atgcatcacacagtggagcaactaggagacaaaacaactaaagaaaactacgctattcag
tgtctccagaagtctctcgaggcagatcccaattctggccaatcctggtactttcttggc
aggtgctattcaagtattggcaaagttcaggatgcctttttatcatacaggcattccatt
gataaatcagaagcgagtgctgatacatggtgttcaataggggtgttgtatcagcaacag
aaccagccaatggatgcgttacaagcctatatctgtgctgtacagttagaccacggacac
gctgcagcctggatggacctgggaactctttatgaatcctgcaatcaacctcaagatgca
attaaatgttacataaatgcaactaggagcaaaaattgtagtaatacctctgcactcaca
gcaaggataaagtacttacaggcccagttgtgcaaccttccacaaggtagcctacaaagt
aaanccaaaatgcttcccagtattgaggaggcatggagcctaccaatcccagcagaactt
acctccaggcagggtgccatgaattcagctcagcaggcctgtaaacctcaccatcacagt
aatgaacctttagtaggtctcagtcagcaacagacggcacaacagtccttaccactacat
atggttccttctaaccaactagatgacctatccaatcctgctaaaaggaaaaggatgtcc
agtcctactaagctaaatgctccagatgtctggtctggtggtcacacagcaccacaccat
ccagtacaacagcaggttccttcatggtacctgacccctcagaaattacagctcttggag
cagttgcgtgcaaaccggaagaacctgaatcagcttcagctgcagatgctggaacagctt
gaggaacagtttgtctcaatgcgacagcaccagcagcagttgagacaggcgacaattgca
caggtacggcctacaggaattcctaatgggccaacactcggatcaacactgcctacaaac
tctgcctctggtcagcaggctcatgttgctctaaccagagtgcctgatcgcattgttcag
tctggaatccgtcctgttgctcctggacagctgatggcaaatggaccttttcctgctgaa
gcatccagaggcccagtaacatgcagcactacgggaatgctgggtaatacagacactatt
tctataggcaataatcatgtaacaggaagtggaagcaatggaaatgtgccttacctgcag
caaaacgcactaactctacctcataaccgcacaaacctgaccagcagcgcagaggagccg
tggaaaaaacaacttgttaactccactcaggggctgaacaaaggtcagagttcacattcg
gcaggtcctaatggtgaacgacctctctcttccactgggccttcccagcatttccagtca
gctggcactggtattcagaatcaggttggacatcccgccatgcctagcaattcactaaca
acacagggggccgctctcaatcacctctcctcttacactgctacctcaggtggacaacaa
ggcattaccttaaccaaagagagcaagccttcaggaaaagcatcatcagtgcctgaaaca
aacaggcattctggagggacacctaacagcactgccagcgtagagggacttcctaatcat
gtccatcaaacgatagcaaatgctgtttcaagttctagtcacggagagtccaagtcacca
ggtgtacttagttcagacaatcctcagctctctgccttgttgatggggaaacccagtaat
aatgggggttctgtgtcttgtgataaagtcaacaatatccatccatctgttcacacgaag
actgagaattcagttgcctcttcaccatcgtcagttgtttctactgcaaccccatctcct
aaatccactgaacaaactactgctaacagtgttaccagccttaacagccctcaaagtgga
ctgggacatacagtaaacggaaaaggtgttgaggactctcaaagtccctgtaaaacagat
tatccattaactatccacaaatcaagtcctcagcttacaccttcagcgtctatctctata
taccccagttcaggagaagtgctcaaggcgtgcagaaatctgggcagaaatggtttatct
aatagtagcattttactcgtcaagtgtccacctcctcgaccagcaccaccaccttaccca
ccgctgccaaaggacaagctaaaccctcctacacctagtatttatttggagaacaaacgt
gatgctttctttcctccgcttcatcagttctgtacgaatcccaacaaccctgttactgta
atccgtggccttgctggcgctctcaaattagacctaggccttttttccaccaagactttg
gtagaagcaaataatgagcatttagtagaggtacggacacaactgatgcagccaacagat
gaaaactgggactccactggatctaagaaaatctggcgctgtgaaagcagtagatcacat
accacaattgccaaatatgcacaataccaggcatcatcattccaggagtcattgcgggaa
gaaaatgaaaaaaagagtactcaccacaaggaccaatcagatagtgaatccacatcatct
gataatggtagcaggagaagaaaaggtccatttaaaaccatcaaatttgggaccaatatt
gatttgtcagatgaaaagaggtggaagtcacagctccatgaactgacaaagttgcctgca
tttgtgcgtgtggtatcagcaggaaatcttttaagtcatgtgggacataccattctggga
atgaacacagtccagctctacatgaaagttccaggaagtaggactccaggtcatcaagaa
aacaacaatttctgctctgttaacatcaatataggtcctggggattgtgagtggtttgct
gttcctgaggtatactggggagttatgaatgacttctgtgaaaagaacaacataaatttc
ttaatgggctcatggtggccaaacttggaggatctttatgaagctaatgtacccgtgtat
cggtttattcagcgccctggagacctggtgtggataaatgctggcacagtgcactgggtt
caggctattggctggtgcaacaacattgcttggaatgttggtcctcttacagcaagccaa
tataaactggcagtggagcgatatgaatggaataaactacaaagtgtaaagtccatcgtt
cccatgattcatctgtcctggaacatggcacgcaacatcaaggtgtctgatcccaagctt
tttgaaatgatcaagtactgcctattgagaacactcaagcaatgccagatgttaagggaa
gctctcatcagtgcaagcaaagagattgtatggcatggccgtacaaaggatgagcctgca
cactactgcagcatttgtgagctggaggtttttgatctgctttttgtcactaatgagagt
aattctcggaagacctacgtagtgcattgccaggactgtgctcgtaagggcagcggaaac
ctggacaattttgttgtgctggaacaatacaaaatggaggatctgatgcaaatctatgac
cagttcacattagctcctccactgccttcatcttcatcttga

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