| Entry |
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| Name |
(RefSeq) TNF receptor-associated factor 2 isoform X1
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| KO |
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| Organism |
cmk Callorhinchus milii (elephant shark)
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| Pathway |
| cmk04141 | Protein processing in endoplasmic reticulum |
| cmk04621 | NOD-like receptor signaling pathway |
| cmk04622 | RIG-I-like receptor signaling pathway |
| cmk04920 | Adipocytokine signaling pathway |
| cmk05168 | Herpes simplex virus 1 infection |
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| Brite |
KEGG Orthology (KO) [BR:cmk00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103184612
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103184612
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
103184612
09143 Cell growth and death
04210 Apoptosis
103184612
04217 Necroptosis
103184612
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
103184612
04622 RIG-I-like receptor signaling pathway
103184612
09152 Endocrine system
04920 Adipocytokine signaling pathway
103184612
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
103184612
09171 Infectious disease: bacterial
05132 Salmonella infection
103184612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cmk03019]
103184612
04121 Ubiquitin system [BR:cmk04121]
103184612
Enzymes [BR:cmk01000]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103184612
Messenger RNA biogenesis [BR:cmk03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
103184612
Ubiquitin system [BR:cmk04121]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
103184612
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
426 aa
MSYIGPLCRQVLRNPAKTACGHRYCMDYIQSVSGKTATVCQMSMEEGVSTKDTTTDPDVA
HKADEYRARIGCQTHVDPGMSEQQNVPREKIDGYENKGLKRKTCCLFQAVGCKYKGTREK
IRKHEEESVGQHIGLLLNEITKLNPDRLPPAAANTLPRLEAEVQELRLRVAAFSNSHRLN
ELCDKLQGFCRTAEAHIAGVEAKSASFEHTLDAAKEMKKCSEIVAVLNSWIQLGNQLILM
ENQLVDVEHQLQQAGQNIQDCTARLEVMEQLTHSGVFIWRIAQLEKRLQEAVDGTTPYLD
SGGFYSCKYGYKMCLRIYLNGHERAQGIHISLYFILLQGHYDTLNQWPFRKKVKLSLLNV
RDQRYSIVKSCVLSHLDLALQRPAASMNAPCGFSTFVSLPELKLRFSEFVDNDEMFVSAE
VDSSSL |
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| NT seq |
1281 nt +upstreamnt +downstreamnt
atgagctacatcggtcccctgtgtcggcaggttctgaggaatccagcaaagactgcttgt
ggacaccgctactgcatggattacatccagtccgtctcaggtaagacagcaacagtatgt
cagatgagtatggaggaaggtgtttcaaccaaggatacaactactgatcctgacgtggct
cataaagcagatgagtatagggcacggatcggctgccagacccacgtggatcctgggatg
tctgagcagcaaaacgtaccaagggagaagattgatgggtatgaaaataaaggtttaaaa
aggaagacttgctgtttgttccaagccgtaggatgtaaatataagggaacgagagagaag
attcggaaacacgaggaagaatctgttgggcagcacatcggtcttttattgaatgaaatc
acaaagctgaatcctgacagactgccacctgctgcggcgaacaccttgccaaggttggag
gcagaagttcaggagttgcgattgagagtcgctgccttttcgaacagtcatcggctgaac
gaactctgtgacaaactgcagggtttctgcaggacggcggaagcccacatcgctggggtg
gaggccaaatcggcctcctttgagcacactttggatgcagcaaaagagatgaagaaatgc
tcggagatagtggctgttttgaacagctggatacagctcggaaatcaacttattctgatg
gaaaatcagctggtggatgttgagcatcaactgcaacaggcaggccaaaacatacaggat
tgcacggcacggctagaggtcatggaacagttaactcatagcggagtgtttatctggaga
attgcacaactcgagaaaaggttgcaagaagctgtcgatggaacaacgccttacctggat
tctggtggattttactcgtgcaaatatgggtataagatgtgtctccgaatatatctgaat
ggtcatgaaagagcccagggaattcacatctcactttattttattttgctccaaggacat
tatgatactttgaatcagtggccattcagaaaaaaggtaaaactctctctgctaaatgtg
agagatcaacggtattccattgtcaagagctgcgttctgagtcatctggacttggcttta
caaagacctgcagcaagtatgaacgcgccatgtggattttccacctttgtgtccttacct
gaattgaaactgcgtttctcagagtttgtggacaatgatgaaatgtttgtaagtgcagag
gtcgactccagcagtctgtaa |
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