Callorhinchus milii (elephant shark): 103185159
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Entry
103185159 CDS
T03088
Symbol
smcr8a
Name
(RefSeq) guanine nucleotide exchange protein smcr8a
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103185159 (smcr8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmk04131
]
103185159 (smcr8a)
Membrane trafficking [BR:
cmk04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
103185159 (smcr8a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
103185159
NCBI-ProteinID:
XP_007901728
LinkDB
All DBs
Position
Unknown
AA seq
946 aa
AA seq
DB search
MIAAPDVVALAREDECAEPTPPPPPVVVWPPSCQSRPENPWCQAPFERDFIMISEFSEQV
GPQPLLTVPDHARLNFDLNYFSLRIMSVDYQASFVGHPPGTGYPKLNFVEDSKVVLGDSK
EGAFAYVHHLTLYDLEARGFVRPFCMAYISADENKIMLQFQELSHEFSRASECLKTGNRK
AFAGELEKKLQDLEYTRNVLHNETEIQKNSNEKGYYTSVAIEKANELANVERCIIEHQDL
LMQVRTYSHKKSREASYVSYEPDCDAEQPEVGLEQSLDPGGLPAKANWSNRRSTYTPKFT
RAKSAKCFEKKLKTLEELCDVYFFTQTLEQLGNLEKSFRGDVCYLLTRQIEMKLLQQQRI
TSFLFEDCVAFSDEEQTEKQRHGYKPLPSHNILSQNVVEDPCESNVAASFESYKSCVESV
PIKMEQQVNIESCHQAVADSIPCKNLQATLDLLDIEGKEKGSISSGESIEVLGTEKSWPN
PIFAKSESQPSLQCQYPEVVKRKLVVTKRTNSEDSIEVLCTTESLIPEDLKASYPSAIYE
EEPAVNNVEECGLRADAMQPFTSPQDANEFSNTNIISNPVTLSNLPEPVDSSCCTGKESP
IFTESRPTLVTEYSDGIINVPPQRSKSVDKISPGDSVMQGGENGLTNLTADQVLTSCERE
DSNLPGNGESGQLLLEDYLDSMSYISTSWCSDRTPSPALPTSPAKRLPGKRKKQCGKNAL
WFIRQYSFAQQAIFSLLSGRTLVVVGEQEGKVKKLIHALSMFVPNSGRGEDPIKQWVTFP
LHIHHLQTWKLIGVQRIISPVGSSVLHSLNRYSRYISILDSDNKSLRCPPYRGLLITRMA
DHRTQIKRGSTYYMHVNNLLTRVCSKAFLYTFCHHLHLPIDGRESEESVACRRLNFLKHH
LGLMNDDGKIVQYLAELIKLHYLHEPAKGLNQVLRFAYVSSIVCKI
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccgcgcccgacgtggtggccctggcgcgcgaggatgagtgcgcggagccgact
cctccgccgccgccggtggtggtgtggccgccctcttgccagtcgcggcccgagaacccc
tggtgccaggcaccgttcgagcgcgatttcattatgatctccgagttctccgagcaggta
ggccctcagcccttgttaaccgtccccgaccatgcccgccttaacttcgatctcaactat
ttctctctcaggatcatgtcggtggattaccaggcctccttcgtggggcacccgcccggc
acgggctaccccaagctcaatttcgtggaggactccaaagtggtgctgggcgactcgaag
gagggggccttcgcctacgtccaccacctgacgctgtacgacctggaagcccggggcttc
gtcaggcccttctgcatggcttacatctcggcggacgagaacaagatcatgctgcagttc
caggagctctcgcacgagttctcccgggcctccgagtgcctgaagacgggcaaccgcaag
gccttcgccggcgagctggagaagaagctccaggacctggagtacacccggaacgtgctg
cacaacgagacggagatccagaagaactccaacgagaagggttactacacgtcggtggcc
atagaaaaggctaacgagctggccaacgtggagcgctgtatcatcgagcaccaggacctt
ttgatgcaggtcaggacttactcccacaagaagtcgagggaagcgagttacgtatcttac
gagccggattgcgacgcggagcaacccgaggtagggttggaacaatccctggatccgggc
gggctgcccgcaaaagccaactggtccaacagaaggtcaacctacaccccgaaattcaca
agggctaagtcggcaaagtgctttgaaaaaaagctgaaaacattagaggagctttgtgac
gtttatttttttactcaaaccctagaacaacttggtaacctagagaaatcgtttcgaggc
gacgtgtgttacctgctaacccgccaaattgaaatgaaacttctgcaacagcagcgaatc
acctcgtttctcttcgaggactgcgtggccttcagcgacgaagagcaaaccgaaaagcag
cggcacggctacaaaccgcttccaagtcacaatattctcagccaaaatgttgtagaagat
ccatgtgagtccaatgtggcagccagttttgagtcatacaagtcttgtgtggagtctgtg
ccaattaaaatggagcaacaagtgaacatagaaagttgtcaccaagcagtggcggattcc
atcccttgtaaaaatcttcaagcgactttagatctactcgatatagaagggaaagagaag
gggagcatcagcagtggtgaaagtattgaggtgctgggcacagaaaagtcttggccaaac
ccaatttttgccaagtctgagagccaaccaagtttgcaatgccagtatccagaagttgtc
aagaggaaacttgtagtaaccaagaggacaaacagtgaggacagcattgaggtcctctgt
accacagagtctttgataccagaagatctcaaggcctcttatccaagtgcaatatacgaa
gaagagcctgctgtgaacaatgttgaagagtgtgggctccgtgcagatgctatgcaacca
tttacaagtccacaggatgccaatgaattcagcaataccaacattataagcaatcctgtc
acactgtctaatttacctgagcctgtagactctagttgttgtactgggaaagaaagccca
atctttactgaatctagacctactcttgtgactgagtacagcgatggaataatcaatgtt
ccaccgcaacgtagcaagtcagtagacaaaatatcacctggagattctgtaatgcagggg
ggagaaaatggattaactaatctaactgctgatcaagtcttgactagctgtgaaagggag
gacagcaatctccctggcaatggagagtctggtcagcttctactggaagactacttggat
agcatgagttacattagtacatcctggtgttctgatagaacaccatcaccagcgttgcca
accagtccagcaaagaggctccctggaaagcgtaaaaagcagtgtgggaaaaatgcattg
tggtttattaggcaatattcttttgctcagcaggcaatcttttctctgttgtctggacgg
acactcgtggtagtaggtgaacaagaaggaaaggtcaagaagcttatccatgctctgtca
atgtttgttcccaactctggtaggggtgaagaccccataaagcaatgggtgacattccct
ttgcacatccaccatttacaaacttggaaacttatcggagttcagagaataatttctcct
gtgggctccagtgtgctgcactcactgaatcgctacagtcgttacattagtatcctagac
tctgataataagagcttgcgctgcccgccttatcgaggactgctgatcaccaggatggcc
gaccacagaactcagataaagaggggcagcacctattacatgcacgtcaacaatctgctg
accagggtctgctccaaggccttcctctacaccttctgtcatcacctgcacctccctatt
gatgggagagagagcgaggaatctgtcgcctgtcgaaggttaaactttttaaagcaccac
ttggggttgatgaatgacgatggcaagattgtacagtaccttgcggagctgataaagctg
cactacctgcacgagcccgcaaagggcttgaatcaggttctacggttcgcctacgtctcc
agcattgtgtgcaagatctag
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