KEGG   Callorhinchus milii (elephant shark): 103185224
Entry
103185224         CDS       T03088                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103185224 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmk03041]
    103185224 (smndc1)
Spliceosome [BR:cmk03041]
 Complex A
  U2 snRNP components
   U2 related factors
    103185224 (smndc1)
 Complex B
    103185224 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    103185224 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR T3SS_needle_F
Other DBs
NCBI-GeneID: 103185224
NCBI-ProteinID: XP_007901806
UniProt: V9L3N6 A0A4W3KGF8
LinkDB
Position
Unknown
AA seq 238 aa
MSDELVKQLASYKAQLQQVEAALSTDADNGDLLKLQKDLQEVIELTKDLLSNQPSVATAN
ADRSSNSLPSHTWKIGDKCMAIWSEDGQLYEAEIEEIDQENGTGAITFAGYGNADVVPLV
NLKPVEDGNDSEELGSDKPKSKKEMVAQQREYKKKKALKKAQRMKELEQEREEQKVKWQQ
FNNRAYSKNKKGQVKKSIFASPESVTGKVGVGTCGIADRPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcggatgagctggtgaagcagctggccagctacaaggctcagctacagcaagtagaa
gctgctttatctactgatgcagacaatggagatctcctgaaattacagaaagatttacag
gaggtgatcgaattgactaaggacttgctgtctaaccagccctctgttgctacagccaat
gcagacagatcgtcaaactccctgcccagccatacatggaagatcggagacaagtgcatg
gccatttggagtgaggatggacaattgtacgaagcggagatcgaagagattgaccaggag
aacggtactggagccatcacctttgctggatacgggaacgcagacgttgtccctttggtc
aacctgaaacctgtggaagatggaaatgattctgaggagctgggtagcgacaaacccaaa
tcaaaaaaggaaatggttgcccagcagagagagtacaagaagaagaaagcgctaaaaaag
gctcagagaatgaaggagcttgaacaggagcgagaggaacagaaagtcaaatggcagcag
tttaacaacagagcctattccaagaacaaaaaaggacaggtaaagaagagcatttttgct
tcaccggagagtgtgactggcaaggttggagttggcacgtgtggaatagcagacagacca
atgactcagtaccaagacacatccaaatacaacgtcaggcaccttatgccccagtaa

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