Callorhinchus milii (elephant shark): 103185540
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Entry
103185540 CDS
T03088
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04530
Tight junction
cmk04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
103185540
09142 Cell motility
04810 Regulation of actin cytoskeleton
103185540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cmk04990
]
103185540
Domain-containing proteins not elsewhere classified [BR:
cmk04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
103185540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
103185540
NCBI-ProteinID:
XP_042190197
LinkDB
All DBs
Position
Unknown
AA seq
1606 aa
AA seq
DB search
MGNSESQNDSERALSGDERAGLARKHMSRSLRIPTKTSRRARPASAARIAHRNSETSTKS
SSTPSIPQTLAGDGLDTGNPGNNIIALAEDFTNPSWVSAVGKNVRPVSYHTGSSTVFSTR
RRSTVEPVRSRDEFDACFEKRAIQNLQNFDERLDLASQAEGRDYHSVTRNGTAILESTKI
RKKRSKSADMWRQDSTEFSFSDLSQERLTSREDLIDNEKGYEERGLVNSHSMELEQLCDS
NRANSLNELYSQKLSSGIINKQPMNKIMTYYQNLTAHSHSTMPSQNTNSVRSSVGNVSVS
SYAAYTLPCRKSHCLSEGASKGRLSEIDDQNRTMQGRRAKTTQDVTSGDGSEYADNSIAG
ATTENYQLSHHSNNTGSTCSPPSFNCRYLGSDDASAGDVLHQGVYENFRSTLESNAVNTE
NLEEAESALSDEQSSGTLSSPGQSDIQTTEQGTVRKTGSLAVKNFIVHKKNKKVELATRR
KWKYYWVSLKGCTLFFYDADGRSGGDQNSVPKHMVWIENSIVQAVPEHPKKDYVFCISNS
LGDSFLFQTCSQTELENWITAIHSACAAAVARQHRREDTVKLLQSEVKKLEQKIDMDEKM
KKMGDMQLSSVNDPRKRKTILSQISLWEQNLEQFQIDLFRYRCYIASLQGGELPNPKRLL
AFASRPTKHAMGRLGIFSVSSFHALVAVRTKIGLKNPSQVISRSVSKRRNRFSSLWGLDT
TSRKKAKERPSINQVFDDNEATLKKSLEGIFDECSVDRSREKNLTTSIQQQTSDSDSWVT
DFLVPSWVSLPHDQPLLVAIHPGDSAQEILETACKAQNLEPGDYYVRLKFTVDNHVQYYI
PKQDIIHELLFQEIEICPKIIRHVQFDKSDASINYGFCVSLVEEEDSRHRMLITDVKEEG
LAFCKGLKTDDEVLEINKQKAEDLNISDLKLMLSESSLSLTIRTYCELADGPFCASPPRR
VRVSDELVDGGFVHHQSRHEKNIKNHMEPSHCEAKFTASLETDEARKSTEQVTAFCRGLH
ELSPTDMSSQPLDSSLPHQATSRQLTDADKLRKVICELVETEQTYVKDLNLLLERYLKPL
QNETFLTQDELDVLFGNLREMVQFQVEFLKTLEDGVRLVPDLEKLETVNQFRKVLFSLGG
SFLYYADRFKLYSAFCASHTKVPKVLVKAKVNPDLKAFLDAQNPKQQHSSTLESYLIKPI
QRVLKYPLLLKELISLTDPDSEEHYHLTVAMKAMNKVASHINEMQKIHEEYGAVFDQLIA
EQTGEKKEVVDLSMGDLLLHSMVTWLNPPASLKCKKDPELAAFVFKTAVVLVYKDGSKQK
RKLGNISQRGYVSDDKDPFRFRYMIPTQALQIRSIAISDAEADCMFEIVHGKSESEGRPE
TTFHFCNSTSDTKRDFVKAVQSVIRDKQRRQLLKTESLPQSQQYMPFGGKRLCALKGARP
VVNRAVSVPCSTSGKRKLSRNRFTIDADDLFERNQNNEPLQLPAVCNDTDRWVEEQFDLG
KYEEHDDIKETDILSDDDEYCQSVKSSSLSKDLQEQLKAMTFQDELLENGKTSTYRTAEK
SQSKMAFSTKQKAVSGTNGIVENNAPEVIWVKREGFISTEKENNEI
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atggggaattcagaaagccagaatgatagcgaacgagccctttcgggggatgaacgtgct
ggtctggcacggaaacatatgtcacgatcacttcgtattcctacaaaaacttcacggaga
gccaggccggcttctgcggccagaattgcacatagaaattcagaaaccagcactaaatcc
agtagcacacctagcatcccacagacattagcaggagatggtctggatacaggtaaccca
ggaaacaatattattgctttggcagaagactttactaatccctcttgggtaagtgcagtt
ggtaaaaatgtaaggcctgtgtcttaccatacaggttcttcaacagttttcagtaccaga
aggcggagtactgtggagccagtaagatccagggatgaatttgacgcttgttttgagaaa
cgtgctattcagaatctacagaattttgatgaaaggttggacttagcttcccaagcagaa
ggtagagattatcattcagttactaggaatggaacagctattttagaaagcaccaaaatc
aggaaaaagcgatccaaatctgcagacatgtggaggcaagatagtacggaattctccttc
tctgatcttagtcaggaacggttgaccagcagagaagatctgatcgataatgagaaaggt
tatgaagaaaggggattggtaaatagtcattccatggaattggaacagttgtgtgatagc
aaccgagccaattctctaaatgaattgtattcgcaaaaactatcaagtggaatcattaac
aaacagccgatgaacaaaattatgacgtattatcagaatttgacagcacattcacatagc
acaatgccatcacaaaatacaaattctgtgaggtcttctgttggaaatgtcagtgtatct
tcatatgctgcctacacgctgccatgcaggaaatcccattgcctttctgaaggggcctcc
aaaggacgattaagtgaaattgatgatcagaacagaaccatgcaaggcaggagagcaaaa
acaacacaggatgttacctcaggagatggaagtgaatatgcagataatagcattgctggt
gcaacaacagaaaattatcagctttctcatcattccaataataccggttcaacatgctct
ccaccatctttcaattgtcggtacctcggtagtgatgatgcttcagcaggagatgtgctc
caccagggggtgtatgagaacttcagaagtacattggaatcaaatgctgttaacacagag
aatctggaggaagcagagtcagctttgagtgatgaacaaagcagtggcaccctcagctcc
ccgggacaatcagatattcaaacaactgagcagggaacagtccgaaaaaccggctcactt
gctgtaaaaaactttatagttcacaagaaaaataaaaaagtggaattggctacacgtaga
aagtggaagtattattgggtatctttaaaaggctgcaccttatttttttatgacgcagat
ggacgatcaggaggagaccagaacagtgtaccaaagcacatggtttggattgaaaacagc
attgttcaagctgtacccgaacatccaaagaaagactatgtcttctgcattagtaattca
cttggagattcattcttattccagacctgcagccagactgaactggaaaactggattact
gccattcattctgcctgtgcagctgcagtggcaaggcagcatcgcagagaagatactgtt
aaactgttgcagtcagaggttaaaaaactggaacagaaaattgacatggatgaaaagatg
aagaagatgggggatatgcaattgtcttcagttaatgatccaagaaaacgaaagaccata
ctcagtcagatctctttatgggagcaaaatctcgaacaatttcagattgatcttttccga
tatcgttgctatattgcaagtcttcaaggaggagaattaccaaatcctaaacgacttctt
gcatttgctagtcggccaactaaacatgcgatgggtcgacttggtattttctcagtttct
tcgtttcatgccctggtggcagtccgtactaaaattggtctgaaaaatccatctcaggta
atttctagatcggtaagcaagaggaggaacagattttcttctttgtggggattggataca
acgtcaagaaagaaagcaaaagaaagacctagcattaatcaggtctttgatgataatgaa
gctacactgaagaaatctttggaaggcatctttgatgaatgttcagtagatcgtagtaga
gaaaaaaatctgaccaccagtattcaacaacaaacatctgacagtgacagctgggttact
gatttccttgtgccctcatgggtttctttaccacatgatcaaccccttttagtggcaata
catccaggagactctgcgcaggaaattcttgaaacggcatgtaaggcacaaaatttggag
ccaggtgattactatgtgcgtttgaagtttacagtggacaaccatgtgcaatactatata
ccaaagcaggacattattcatgagttgttgttccaagaaattgaaatttgtcccaaaatt
attcgtcatgttcagtttgataagtctgatgcttctattaattatggattttgtgtgtct
ttagttgaagaggaggactcacgtcatcgaatgcttataacagatgtgaaagaagagggt
ctagctttctgtaaaggtctgaaaacagatgatgaagttttagagattaataaacagaaa
gctgaagatctgaatatatctgacttgaagctaatgctatctgagtcttcactttctctc
acaatacggacatattgtgaactagcagatggtccgttctgtgcttctcctccaaggcga
gtcagagtatcagatgagttggttgatggtgggtttgttcaccatcaaagtagacatgaa
aaaaacataaagaaccatatggaacctagccattgtgaagcaaaattcactgcatcactt
gaaactgatgaagcacgcaaaagtacagaacaggtgacagcattttgtcgaggtctgcat
gaattaagtccaaccgacatgtcatcccagcctttggattcttcattacctcaccaggct
acatcgagacagctgactgatgctgataaattgcggaaggtcatttgtgaacttgtagaa
acagaacagacatatgtaaaggatctgaatctactcttggagagatatttgaaaccactg
cagaatgaaacctttctcactcaggatgagcttgatgtcctttttggaaacttgcgagaa
atggttcagtttcaagttgaatttttgaaaacgttagaggatggtgtgagactggtgcca
gaccttgaaaaacttgaaacagttaatcaatttaggaaagtactcttctcattgggcggt
tcattcctgtactatgctgatcgtttcaagctatatagtgcattttgcgccagtcacaca
aaggttcccaaggttcttgttaaagcaaaagtcaatcccgatttaaaggccttcctcgat
gcgcaaaatcctaaacagcagcattcatcaacgttggagtcctaccttatcaaacccata
caacgggttctgaagtatccccttctgctgaaggaactgatctcgctgacagaccctgac
agtgaggaacattaccacttaacagtggcaatgaaagcaatgaataaggtggcaagccat
atcaatgaaatgcaaaaaatacatgaagaatatggtgctgtgtttgaccagcttatagct
gaacaaactggagagaaaaaagaggttgtggatctttcaatgggagaccttcttctccat
tctatggttacttggctcaatcctcctgcatctttgaaatgtaaaaaagatcccgagctt
gcagcttttgtgttcaaaactgcagttgttcttgtgtataaagatggctctaagcagaaa
agaaaattgggaaacatttctcagagagggtatgtctctgatgacaaggatccattcaga
tttcgttatatgattcccactcaggcattgcagattcgatctattgccatctcagatgca
gaagctgactgtatgtttgaaattgttcatggaaaatcagagtcagaagggagaccagag
acaacttttcatttttgtaacagtacttcagacaccaagcgggattttgtcaaagctgtt
cagtcggttatccgtgacaagcagcgaaggcaacttctaaaaactgaaagtttaccacaa
tcccaacagtacatgccttttggaggaaagaggctctgtgcactgaaaggagcaaggcca
gttgtaaaccgagctgtttcagtaccttgcagcacctcaggaaaaaggaaattatctagg
aacagattcactattgatgcagatgatctgtttgaacgcaatcaaaataatgagccattg
cagttgccagcagtttgcaatgacactgatcgttgggtagaggaacagtttgatcttggt
aagtatgaagagcatgacgacattaaggagactgatattctaagtgatgatgatgaatac
tgccagtctgtgaaaagttcatcactgtcaaaagatctgcaagagcagctaaaagcaatg
acctttcaagatgagcttcttgagaatggaaaaacatcaacctacagaacagcagaaaaa
tctcaatctaaaatggcattttctacgaagcaaaaagctgtatcgggaactaatggcatt
gtggaaaacaatgcacctgaggtgatctgggtgaaacgtgaaggcttcatttcaactgaa
aaagaaaataatgaaatctaa
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integrated database retrieval system
