Callorhinchus milii (elephant shark): 103186026 Help Entry 103186026         CDS       T03088                                  Symbol traf6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism cmk  Callorhinchus milii (elephant shark) Pathway cmk04010   MAPK signaling pathway cmk04120   Ubiquitin mediated proteolysis cmk04140   Autophagy - animal cmk04144   Endocytosis cmk04517   IgSF CAM signaling cmk04620   Toll-like receptor signaling pathway cmk04621   NOD-like receptor signaling pathway cmk04622   RIG-I-like receptor signaling pathway cmk05132   Salmonella infection cmk05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:cmk00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     103186026 (traf6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     103186026 (traf6)   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     103186026 (traf6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     103186026 (traf6)    04140 Autophagy - animal     103186026 (traf6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     103186026 (traf6)    04621 NOD-like receptor signaling pathway     103186026 (traf6)    04622 RIG-I-like receptor signaling pathway     103186026 (traf6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     103186026 (traf6)   09171 Infectious disease: bacterial    05132 Salmonella infection     103186026 (traf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cmk04131]     103186026 (traf6)    04121 Ubiquitin system [BR:cmk04121]     103186026 (traf6) Enzymes [BR:cmk01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      103186026 (traf6) Membrane trafficking [BR:cmk04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     103186026 (traf6) Ubiquitin system [BR:cmk04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     103186026 (traf6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 SlyX DUF7310 CENP-F_leu_zip TRAF3_RING RING_XB3-XBAT31 U-box zf-RING_11 ANG-1 DM zf-C3HC4_IRF-2BP1_2 TMF_DNA_bd Tropomyosin bZIP_2 DUF16 TRAF6_Z2 Cortex-I_coil PEARLI-4 Motif Other DBs NCBI-GeneID:  103186026 NCBI-ProteinID:  XP_042197525 LinkDB All DBs Position Unknown AA seq 540 aa AA seqDB search MNEVEDDLSCEGGFQSACSAACAVGMKEDCGVNGPCSQPLPEDTQGYDVDFEPALESKYE CPICLMALREAVQTPCGHRFCRGCIVKSIRDAGQKCPVDNEMLLETQLFPDNFAKREILS LMVKCPNKGCYQRMELRHLEDHKSGQCDYAFVECLLCDAALLKKDLKEHTDSKCPKRPVS CANCAMLMPYQDIQGHNLNCPLANVTCEYCNMELIREQMPNHYDLDCPKAPMPCTFSMFG CPEKMQRHALAMHLQDFTQAHMRLMAQTLRSMSSQASCTEIVDLDGSFLPLLPGSLLPSQ LPPCDCPPAVQHLKETLQHLEGRLVRQDHQIRELTAKMETQCGQVGDLKRRNRALEERVS ELEAQQCNGIFIWKVENFSHHLRAQGEDQPVVLHSRGFYTGKPGYKLCLRMHLQTPSAQR CSNYISLFVHTMQGEYDTYLPWPFQGTIRLSIIDQSEGSVKHNHEEIMESKPELAAFQRP TVPRNPKGFGYVTFMPLHMLRQHSYVRDDALLVRCEVMARLDMNWRRKEDFQPRSADSGL NT seq 1623 nt NT seq  +upstreamnt  +downstreamnt atgaatgaagtagaggacgacctgtcctgtgagggggggttccagagcgcttgctctgcg gcctgcgctgtggggatgaaggaggattgcggggtcaatgggccgtgctcccagcccctc cccgaggacacgcagggctacgacgtggacttcgagccggccctggagagcaagtacgag tgtccgatctgcctgatggcgctgcgggaggccgtgcagacaccctgcgggcacaggttc tgtcgcggctgcatcgtcaagtccatcagagacgccgggcagaagtgtcccgtggacaat gagatgttgcttgaaacgcagcttttcccggataattttgccaagagggaaattctctcc ctgatggtcaagtgccccaacaagggctgttaccagaggatggagctacgtcacttggag gatcacaagagcgggcagtgcgactatgcgtttgtggagtgcctgctgtgcgatgctgcg ttgttgaagaaggacctgaaggaacacacggactccaagtgccccaagcggccagtctcc tgtgccaactgtgccatgctcatgccgtaccaggacatccagggccataacctgaactgt ccactcgccaacgtaacctgtgaatactgtaacatggagctgatccgcgaacagatgccg aaccactatgacctggactgtcccaaggcgcccatgccctgcaccttcagcatgtttggc tgcccagagaagatgcagagacacgcattagccatgcacctccaggacttcacacaggcc cacatgaggttgatggcacagaccctgagaagcatgagctcccaagcctcctgcaccgag attgtggacctggacggttccttcctgcccttgctgccaggctccctgttaccttcccag ctcccgccctgcgactgccccccggccgtgcagcacctgaaggagaccctccagcacctg gagggacgcctggtgcgtcaggaccaccagatccgggagctgacggccaagatggagacc cagtgcgggcaggtgggagacctcaagcgccgcaaccgagccctggaggagagggtgtcg gagcttgaggctcagcagtgcaacggcatcttcatctggaaggtggagaacttcagccac cacctgagggcgcagggggaggaccagcctgtggtgctgcacagtcgaggcttctacacg gggaaacccggctacaaactgtgcctacgaatgcacctgcagacgcccagcgcccaacgc tgttcaaactacatttccctcttcgtgcacaccatgcagggcgagtacgacacctacctg ccctggcccttccagggcaccatccgcttgtccatcatcgaccagtccgagggctccgtc aagcacaaccacgaggagatcatggagagcaagcccgagctggcggccttccagaggccc acggtgcctcgcaaccccaaaggctttgggtacgtgaccttcatgcccctgcacatgctg aggcagcactcatacgtgagggacgatgccctcctggtgcgctgcgaggtcatggccagg ctggacatgaactggagaaggaaggaggacttccagccacgctcggcagacagtgggctg tga

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