Callorhinchus milii (elephant shark): 103186827
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Entry
103186827 CDS
T03088
Symbol
lfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk00514
Other types of O-glycan biosynthesis
cmk04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
103186827 (lfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
103186827 (lfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cmk01003
]
103186827 (lfng)
Enzymes [BR:
cmk01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
103186827 (lfng)
Glycosyltransferases [BR:
cmk01003
]
Glycan extension
O-Glycan
103186827 (lfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
103186827
NCBI-ProteinID:
XP_007904255
LinkDB
All DBs
Position
Unknown
AA seq
257 aa
AA seq
DB search
MGTGLGLGENVNVHCSIYSSQTYIFTDGEDEELKKRTGGRMVNTNCSAAHSRQALSCKMA
VEYDKFIESGKKWFCHVDDDNYVNARTLVKLLSQYPHAQDIYIGKPSLDRPIEATERISE
NKVRPVHFWFATGGAGFCISRGLALKMSPWASGGHFMNTAEKIRLPDDCTIGYIIEAVLG
VKLIRSNLFHSHLENLQQVLRSDIANQVTLSYGTFENKRNAINMKGGFSVEEDPSRFRSI
HCLLYPDTPWCPSNFTY
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgggcactggcctggggcttggggaaaatgttaatgttcattgttccatttattcttca
cagacttatatcttcaccgatggcgaagacgaggaactaaagaaaaggacaggcggtcgc
atggtcaacaccaactgctcggccgctcacagccgccaggccctctcctgcaagatggcc
gtggagtacgacaagttcatcgagtctggaaagaagtggttctgccacgtggacgacgac
aattacgtgaatgcgcgcaccctggtgaagttactgtctcagtaccctcatgcacaggac
atctacatcggcaaacccagcctcgatcgccctatcgaggccactgagaggatcagcgaa
aataaagtgcgtccagtgcatttctggtttgcgaccggtggagctggcttctgcatcagc
cgaggattggctttgaagatgagcccgtgggcaagcggagggcacttcatgaacacggca
gagaaaatccgtctcccggacgactgcacgatcgggtacatcatcgaggcagttttggga
gtgaagttgatccggagtaacctgttccattcgcatttggagaacctccagcaagtactg
agatctgacattgctaaccaggtcacgctgagctacgggacgtttgaaaacaaaaggaac
gccattaacatgaaaggcggcttctctgtggaggaggatccatctcggtttcgttcaatc
cattgtctcctctaccccgataccccatggtgtcccagcaacttcacttattaa
DBGET
integrated database retrieval system
