Callorhinchus milii (elephant shark): 103187554
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Entry
103187554 CDS
T03088
Symbol
ldlra
Name
(RefSeq) low density lipoprotein receptor a isoform X1
KO
K12473
low-density lipoprotein receptor
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03272
Virion - Hepatitis viruses
cmk04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
103187554 (ldlra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103187554 (ldlra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmk04131
]
103187554 (ldlra)
Membrane trafficking [BR:
cmk04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
103187554 (ldlra)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
SGL
EGF_CA
DUF5050
hEGF
TMEM154
EGF
EGF_3
Motif
Other DBs
NCBI-GeneID:
103187554
NCBI-ProteinID:
XP_042200596
UniProt:
V9KE93
LinkDB
All DBs
Position
Unknown
AA seq
873 aa
AA seq
DB search
MERLRALVPLLLLITVTCLSPPPADGEVFTGLCEKGSFRCGNGRCIKDHWLCDGQSECED
GSDESVETCKNKTCSSTEFNCGGRINKCIPKTWVCDSQKDCESGIDEQNCPEKTCTTDEF
RCNDGNCVSLTFVCDEEPDCQDGSDEVNCPVPTCSPEYFQCNSSMCIPRLWACDDDADCP
DGSDEWPQNCGGRQPTKPVNPCTGLEFRCRSGDCIHMNWRCDGNEDCRDKSDEENCVVTT
CRPDEFQCNDGTCIPGSQQCDKEYDCHDLSDEEGCMNVTKCEGPNKFKCKSGECIHMDKV
CNQQRDCRDWTDEPLKECGQNECVNGNGGCSHICKDLKIGYSCLCRPGYRLVNKSKCEDV
DECENMDKCSQICINLEGGYKCECNEGYQMDPVTKQCKAIGTVAYLFFTNRHEVRRLTLD
RREYTQLIPSLKNVVALDMEVAENKIYWADLSQKKIYSVLMDKANNSSHHATVIGTEIQA
PDGLAVDWIHGNIYWTDSAISTISVANTAGSKRKTLFRQELSKPRAIVVDPVHGFLYWTD
WGSPAKIEKGGLNGVDRMTLVIDGIEWPNGITLDMLNQRLYWVDSKLHTLSSIGVDGSNR
KTLITSEEKLAHPFSVTVFEDKVFWTDLDDNAIFSANRLTGENILTVIEDLEGPEDIVLY
HHLKQPEGTNWCEKSQLPNGGCEHLCLPAPQINGHSPKYTCVCPDGQHLGPDMRQCFPGG
DQRKVPVVRTTPRAIPNPARPAITKAPSASTKLPFVTTATRKVTQSKAVFPTVHEMNTVS
QQAQNNIAAEATEQGHKRANALWIVLPLVLLSLLSAAVYFVWKNWKLKNTNSINFDNPVY
QKTTEDDEIHIGRNQVGYTYPTRAVVSLEDDAA
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggagagactccgcgctctcgtcccgctgctgctgctgatcaccgttacctgcctctcg
ccgccgcccgctgacggggaagtgtttactggattgtgtgaaaaggggagtttccgctgt
ggcaacggacggtgcattaaagaccactggctgtgtgatggccagtcagaatgtgaggat
ggttccgacgagtccgtggagacttgcaaaaataaaacgtgcagttctacagagttcaac
tgcggtgggcgtattaacaagtgcatccccaaaacctgggtctgtgattcgcagaaggat
tgtgaaagtggcattgatgagcagaactgcccagagaaaacctgcactaccgacgagttc
cggtgcaatgacggaaactgcgtctcgttgacctttgtgtgcgatgaggaaccggactgt
caggatggcagcgatgaggtaaactgccccgtcccgacctgcagccccgaatacttccag
tgcaacagcagtatgtgtatcccgcgcctctgggcctgcgacgacgacgcagactgtccc
gatggatcggacgagtggcctcagaactgcggcggccgacagcccactaagccagtcaac
ccctgcaccggcctggagtttcgctgcaggagcggagactgcatacacatgaactggcgg
tgtgacggcaacgaggactgcagggacaagtcggacgaggagaactgcgtggttaccacc
tgccgacctgatgaatttcagtgcaatgatgggacgtgcattcccggaagccaacagtgt
gacaaagagtacgactgccatgatctgagcgatgaggaaggctgcatgaatgtgacgaaa
tgtgaaggtccaaacaagttcaagtgcaagagtggagagtgcatccatatggacaaagtg
tgtaaccagcagagggactgcagagactggaccgacgagccactgaaggaatgtggtcag
aatgagtgtgtgaatgggaacggtggctgctcgcacatctgcaaagacctgaagattggg
tactcgtgcctctgcaggcctggctacagactggttaataaaagcaaatgtgaagatgtc
gatgagtgtgagaacatggacaagtgcagccagatctgcatcaacctggagggtggctac
aagtgcgagtgtaacgagggctatcaaatggacccagtcactaagcagtgcaaagcgatc
ggtacagtcgcctacttgtttttcaccaaccggcacgaggtacgcagactgacgctggac
aggagagagtacacccagctcatccccagcctgaagaatgtggtggccttggacatggaa
gtggctgagaacaagatttactgggctgatctctcgcaaaagaagatctatagtgttctg
atggacaaggccaacaattcctcccatcacgcgacggtgatcgggacagaaatccaggca
ccggacggcctggccgtggactggattcacgggaacatctactggacggattccgccatc
agcaccatttctgtggccaacaccgcaggttccaagaggaaaactctcttcaggcaggaa
ctttcgaagcccagggccattgtggtggatccagttcatgggtttctgtactggactgac
tggggcagcccggccaagattgagaaagggggtctgaatggtgttgaccgtatgactctg
gtcattgacggcattgaatggccaaatggcatcactctcgatatgctgaatcagcggctg
tattgggtggattccaagctgcacaccttgtctagtatcggagttgacggcagtaacagg
aaaacactaatcacctcggaggagaagctggcacatcccttctcggtcactgtgtttgag
gataaggttttctggacggacttggacgataatgctatattcagtgccaacagattgact
ggggagaatattctaactgtgatcgaggacctggaaggtccagaggacattgtcctttac
catcacctcaaacagcctgaaggtaccaattggtgtgagaagagccagctccccaatgga
ggttgtgagcatctgtgtcttccagctcctcaaatcaatggccactcaccaaagtacact
tgcgtttgtcctgatgggcagcacctgggaccagacatgaggcagtgctttccaggcggc
gaccagcggaaggtacctgtagtccggacaaccccaagagcgatccctaacccagctaga
cctgccatcaccaaggctccgtcagccagcaccaagcttcccttcgtcaccaccgccacc
aggaaggtgacacagtccaaggccgtgtttcccaccgtgcacgaaatgaacacagtttca
cagcaagcccagaacaatatcgcggctgaagccaccgaacaaggccacaaacgagccaac
gctttatggatcgttttgcctttggtgctgctgagtctgctgtcagccgctgtttacttt
gtctggaaaaattggaaattgaagaacacaaacagcatcaacttcgataaccccgtttac
cagaaaaccaccgaggatgatgaaatccacatcggcaggaatcaagtgggctacacctac
cccacgagagcagtggtgagcctggaggacgatgctgcatga
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