Callorhinchus milii (elephant shark): 103188232
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Entry
103188232 CDS
T03088
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04010
MAPK signaling pathway
cmk04020
Calcium signaling pathway
cmk04510
Focal adhesion
cmk04518
Integrin signaling
cmk04540
Gap junction
cmk04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103188232
04020 Calcium signaling pathway
103188232
09133 Signaling molecules and interaction
04518 Integrin signaling
103188232
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103188232
04540 Gap junction
103188232
09142 Cell motility
04810 Regulation of actin cytoskeleton
103188232
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cmk01001
]
103188232
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cmk04090
]
103188232
Enzymes [BR:
cmk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
103188232
Protein kinases [BR:
cmk01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
103188232
CD molecules [BR:
cmk04090
]
Proteins
103188232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_PDGFR_d4
Ig_3
I-set
Ig_2
VEGFR1-3_N_Ig-like
ig
Ig_VEGFR-1-like_5th
V-set
VEGFR-1-like_Ig-like
Motif
Other DBs
NCBI-GeneID:
103188232
NCBI-ProteinID:
XP_007906332
UniProt:
A0A4W3HER8
LinkDB
All DBs
Position
Unknown
AA seq
1085 aa
AA seq
DB search
MSNIHRLPLITVLLLLWFGEANGRQLETQEIVLEPSASLTLNCPGSGEVKWQFKEASGSY
FEHDGASLPILNSTALDTGEYHCFRDDLLVKIFYVFVPDPRMWFLPQSPDEQVIMMEYSL
AFLIPCRITNPELNVTLYHDETQSLWETPFNKYEGFFDRFEDGTYICIAELLGVRRESEP
YIVQTFKVSPYLDVQLHTSKSIVKIGEAINVTCSVKGNQLVHFNWSYPRKEWGKEKEKKE
TVIDGAQEVHSTLLLEEARLADSGVYNCTVLGYYEHQFEKKSLEIIVLEHGFVRLETEMS
DIEYANLSEVKSFAVSITAYPPPLVMWLKDNVPCNEKTNQITFSNKSLGGNRYQNVLNLI
RVNEEDIGNYSISVWNEGDKKQITFSLRVNVPARILTLTDRQHPNGKQTVTCVAEGSPVP
EISWFTCNDLKRCNSGKVWNPLPLNSSTFRVESFRVENGELGPMRVQSVLTQQEIVETAA
VRCTTTNPFSSESRQVKLVSTTLRSQLVIVAAILVLLIIIVVALAILVVVWQQKPRYEIR
WKVIESVSLDGHEYIYVDPMQLPYDSSWEFPRDQLSLGRTLGSGAFGRVVAATACGLSSS
QSAMKVAIKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIMTEYCR
HGDLVDYLHRNKHTFLQAYTNHSSQQTDRVTHGEERVKSYIALSFENDGGYMDMSKDNFL
EYVPMVEVKNGTNYTEIEHSGYDTPYTNEHYSATEEDRREDVLLISESVALTYMDLVAIS
YQVAQGMEFLASKNCVHRDLAARNVLICEGKLAKICDFGLARDIMNDSNYISRGSTFLPL
KWMAPESIFNSLYTTLSDVWSYAVLLWEIFTLGGTPYPELPLNDQFYNAIRHGYRMPKPQ
YAASEIYEIMQKCWNDDFEKRPPFSGLVTSMGKLLNESYKKKYMKITEEFLKSDHPAVCR
TRRSFTNTDQNVIYSNCVGSTPSPSGANSTENGYIIPLPDPSPDPSPDPEPSPEPSPEPT
NVNGNSENVTLEHGTATRPSSLMNEGNEANMHPSQCSQVKREPREQEQTSTDPKINPSDV
EDSFL
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacattcaccgactcccactgatcacagtgctcctgttgttgtggtttggcgag
gccaatggacgtcagttggaaactcaagagattgtgttggagccctcagcgagcctgacc
ctgaactgcccggggagtggagaggtgaaatggcagttcaaagaagcctctgggagctac
tttgaacatgatggagcctcgctgcctatactcaactcaactgccttggacacaggggag
taccactgcttcagggacgacctcctcgtgaagatcttctatgtttttgttccagatcct
cgcatgtggtttctcccacaaagtccggacgagcaggttatcatgatggaatattcactg
gcgttcctgatcccgtgtcggatcacaaatcctgagctcaacgtcaccctatatcacgat
gagacccagtccctgtgggaaactcccttcaataaatacgagggattttttgataggttc
gaggacggcacctacatctgtatagcagagcttctaggagtgcgtcgggaatctgagcca
tacattgtgcagaccttcaaagtttcaccgtatcttgatgttcagcttcacacctccaaa
agcatcgtgaaaataggggaagccatcaacgtgacctgctcagtgaaagggaaccaactg
gtgcattttaactggagctacccgagaaaggagtgggggaaggaaaaggaaaagaaggag
acggtgattgacggggctcaggaggtgcactcaactctgcttctggaagaggcgagactg
gcagactccggagtctataactgcaccgtcctgggatattatgagcatcagtttgagaag
aaatcccttgaaattattgttcttgagcatggatttgtacgtctggaaaccgagatgagt
gacatagaatacgccaacctttctgaggtgaagagctttgctgttagtatcacagcttac
cctccgccgctcgtcatgtggctgaaggacaatgtgccgtgcaatgagaagaccaatcag
ataacattcagcaacaaatcactggggggaaaccgctatcagaacgtcttgaacctgatc
cgtgtaaatgaagaagatatcgggaactatagcatttctgtttggaacgaaggtgacaag
aaacagattaccttcagtttaagagtaaacgtaccggccagaatcctgacgctgactgac
cgccagcaccccaacgggaagcagacagtgacatgtgtggctgagggctccccggtccct
gaaatcagttggttcacgtgcaacgatctgaaaaggtgcaactcagggaaggtgtggaac
ccgctgcccctgaactccagcacgttccgtgtggagagcttccgtgtggagaacggtgag
ctggggccgatgcgggtacagagtgtcctcacacagcaggagatagtggagactgcagcc
gtgcgctgcaccaccaccaaccccttcagctcggagagccgtcaggtcaagctggtctcc
acgactctccgctcccagctggtcattgtggcagctatcctggtgctgctgatcatcatc
gtcgtcgctctggccatcctggtggtggtttggcagcagaaaccccggtacgagatccga
tggaaggttattgagtccgtcagcctggatggacacgagtacatctacgtagaccccatg
cagctgccatatgattccagctgggagttcccccgagaccagctgtccctgggtcggact
ctgggctcgggagcttttggcagggtcgtggcagccaccgcctgcggcctgagcagctcc
caatcagccatgaaagtggccatcaagatgctgaaatcaacagccaggagcagcgagaaa
caggccctgatgtcggagctgaagattatgagccacttggggcctcatttaaacattgtc
aacctcctgggagcctgcaccaaaggaggtcccatctacatcatgaccgaatactgtcgc
cacggagacctggtggattacctacacaggaacaagcacactttcctgcaggcctacacc
aatcacagcagtcaacagacagatagagtgacccacggcgaggagagagtcaagagctac
atcgctttgtcgtttgagaacgatggaggctacatggacatgagcaaggacaacttcctg
gagtacgtgcccatggtggaggtgaagaatggcaccaactacaccgaaatcgagcactca
ggctacgacacgccttataccaacgagcactactccgccacagaggaggatcgaagggaa
gatgtgctgctgatcagtgagtcggtggcgctcacctacatggacctggtggccatcagc
tatcaggtggcccagggaatggagttcctggcttccaagaattgtgtccaccgcgaccta
gccgccaggaacgtgctgatttgtgagggcaaactggctaaaatctgcgactttggtttg
gccagagacatcatgaacgattccaactacatttcccgaggcagcacgttcctgccactg
aagtggatggcgccagagagcatcttcaacagcctgtacactacactcagcgatgtctgg
tcctacgctgtcctcctatgggagatcttcacactgggtgggacgccctacccagagctg
cctctcaacgaccaattctacaatgccataaggcacggttaccgcatgcccaagcctcag
tacgctgccagtgaaatatacgaaataatgcagaaatgctggaacgatgactttgagaaa
cgcccacctttctcaggtttggtgacatccatggggaagctgctaaatgagagttacaag
aagaaatatatgaagattaccgaagagtttttgaagagcgatcacccagccgtctgccgc
actcgccggagttttaccaacaccgaccagaacgtgatctactccaactgtgtgggtagc
acaccatcgcccagcggagcgaacagcaccgagaatggctacatcatccccctgcccgac
cccagccctgaccccagccctgaccccgagcccagccccgagcccagcccagagcccacc
aacgtgaacggcaactcggagaacgttaccctagagcacggcaccgcgaccagacccagc
tctctgatgaacgagggaaatgaagcaaacatgcaccccagccagtgctcgcaggtaaag
cgtgagcccagagagcaggagcagaccagcactgaccccaaaatcaacccgtctgacgta
gaggacagttttctgtaa
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integrated database retrieval system
