Callorhinchus milii (elephant shark): 103189703
Help
Entry
103189703 CDS
T03088
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog isoform X2
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03440
Homologous recombination
cmk03460
Fanconi anemia pathway
cmk04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103189703
09124 Replication and repair
03440 Homologous recombination
103189703
03460 Fanconi anemia pathway
103189703
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmk01009
]
103189703
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmk04121
]
103189703
03036 Chromosome and associated proteins [BR:
cmk03036
]
103189703
03400 DNA repair and recombination proteins [BR:
cmk03400
]
103189703
Enzymes [BR:
cmk01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103189703
Protein phosphatases and associated proteins [BR:
cmk01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103189703
Ubiquitin system [BR:
cmk04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103189703
Multi subunit type E3
BRCC complex
103189703
Chromosome and associated proteins [BR:
cmk03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
103189703
DNA repair and recombination proteins [BR:
cmk03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
103189703
BRCA1-A complex
103189703
BRCA1-B complex
103189703
BRCA1-C complex
103189703
BRCA complex
103189703
FA (Fanconi anemia) pathway
Downstream FA components
103189703
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
BRCT_assoc
BRCT_2
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
103189703
NCBI-ProteinID:
XP_007908385
LinkDB
All DBs
Position
Unknown
AA seq
1860 aa
AA seq
DB search
MKTIRAFELDTGFEFSITNALTKATENISTYQQLWLEDSNSQSTNTSPKAVARGGYTNHA
LKVSTDLPVTESVRRVSPRTKRQKVDAAAISVEIDSDSSDEPLFTANVNVSSALQPESVN
KQGTCQTGPVDQSQAERLIDGNNSKLASKTVLEQLFSSEIDENNVSDQELVELDSDSCAN
ESETAEKQESKGPSERSFCSPEVHSPPGVSNKVDSQNLAGHNGEMVAATVTQICAENQCF
IDSGEEFLDKLALKRGKGGEYIPEDLKTNDHTSPAKGFLRGEEKPSDPPASAKRKGQRSI
ERVSEWLSNIDAEEVASLGVKFNPSRQRRESDAEGGESTTTDENSGLGCSEAIARGVLPS
PLEDRNPSKAAGANAEDQIFGKTYKRGRRESPRISRLKSDGKGHGDDPSPRGESNFHGVD
CNKRQKGKKRKSGCLLGPEDFIKKNGSDQDKEHRGDHEEHATARSVHSEMDKATNGHSNN
QDFVVAPLGGEAARNVLAEDDDRSGEEQCRGRPDPEPCVSLAKSKRKLNRNSGKRKVKKT
PGKQPRKGTKRLQLVGQNEMERIQLAQADPGRSPSDANEIKIDSFPSSEEPARKEQEVRS
TRRSGRLKLLDQELLLHGNRRSGKSGSCLKTARIPEPSEESADVRRPDLVIMETGSSQLQ
EVLVPKLPDNINRDNPPPCGLCEFPPVQQLNPTSPVKSLEVARQGCDLPCGVEHLLGSDC
SSGTQASLLLLAPQPVHGDLCDELRVQPECAKDRKLSAGGVSGLSAVPPGDELAEATEKM
TVASETEVAPETEDSEVDTQALLKTFRSTKRKSFVLQPVDNRAPSAAKPVPTSGEPAADL
KETSERLAVRLERARDFNESRNEDETGSQNEQEDALVTSKAKAKLPVVELNIMSQQCRRT
EGEFLDFVPPTFGSPVMPPFPQGGQQRATPPSGSPGAATRSSTRSSRRRGSSDGVVAGVT
ERETLRSDRSSQRNSLVPATPTSEHGQSVQQANPGFPCGVEEITVGTELACSSNPESTLL
FSAKSQAVTGEGTRLKSGSKADEMSEPGGFCNRGEPSHSQRNFRAKVGDGDSTEDELADQ
AEVTKVASQLKERRSPLASPMGSSTPEGLVEERVNQGGLEKEGGEVQSESQVRRVEELLH
CEDEEMAEPSERGLEDSGGPALVVGRRKRPVKLSSSSSSGSELSDEELPCFQMFGFKKSG
SNVTSATQSPLSTALVPSKDTLGKIFSPPPKSDAGIKNTCSQVNAALEEFRENLLRNRCL
SPSESSEESPDLFSSDSDCCSTPSGSQAEQGASNKPAREPISSGSKTKRDGKRRSSQVAK
IEKTLQRREASDHQQSREPGEAVPEHSGGGQAACYDSEASHTGDSLSSDSELLTTQQRDA
IQINLKKLKEEMAVLEAALEQDTEQQASQNTAHSLSRSPQDTSPVLSEDEQSAVASVTRA
GAGQALSEAATNLISESKYVAETIPTEPESQQDTSLIFRDREQNECPESPEYAVSPSLTE
RQMNRMPLTNWTVAGALGRSQSERNSQGEDVGIPHTPPQQESRASAVTAGQEELGGVAKL
QRSNGKGKDCGSEQTEAVGSLLAASSRCQPAPGTAASACTSQVADGVGRPEASSEGLEQS
RSLLTSSPIFNKSADSATSKSPAMTTQRKMSFVASGLDKHEILLVQRFAEKTGGAITSQF
LPSTTHVVMRTGTSLVCERTLKYFLGIAGRRWVISYQWILECFKEGRIIEESEFEVRGDV
INGRNHQGPRKARQTSNGQLLLTDYEVCCWGSFTGMSKDQLEWMVDLCGASIAKEPYLFT
YNPGRVSVVVVQPDANPASTDYRGMERRFSAAVVTREWVLDSVACYCCHPLEAYLLGSPR
NT seq
5583 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaatccgcgcctttgaactcgacaccggttttgaattctccatcaccaacgcc
cttacaaaagcaacagagaacatcagcacttaccagcagctgtggctggaagacagcaac
tcccagagcacgaatacatctccgaaagctgtcgctaggggaggctacacaaaccacgct
ttgaaagtcagcactgacttacccgtgactgaatctgtaagaagagtttcccccagaacc
aagaggcagaaagtagatgctgccgccatctctgttgagatagattcggattcctcggat
gaacctttgttcacagctaatgtcaacgttagttctgccctgcaacctgaaagtgtgaat
aagcaaggaacttgccaaacggggccagttgatcagtctcaagctgaaaggctcattgac
ggaaataattcaaaactggcaagtaaaacggtgctggagcagcttttctcatcggaaata
gatgaaaacaatgtgtcagaccaggagttggtcgagttggacagtgattcttgtgcgaac
gaatctgagaccgcagaaaagcaagagtctaagggcccgtctgagaggagcttctgcagc
ccagaggtccattctccacccggtgtttcaaataaggtggattctcagaacctcgccgga
cacaacggggaaatggtggcagcgacggtgacacagatttgcgctgaaaaccaatgtttc
atcgacagtggagaagagtttttggacaaattggctttgaagagaggcaagggtggggag
tacatccctgaagatctcaagaccaatgaccacacttccccagcgaaaggctttctgagg
ggcgaagagaagccgagcgacccaccggcctcggccaagagaaaagggcaacggagcatt
gagagagtcagcgagtggttgtcgaatatcgatgctgaggaggtagcgtctctgggcgtg
aaatttaatccaagtaggcagagaagggagtcggacgcagagggaggagagagcaccaca
accgatgagaattccgggttaggttgctccgaagcgattgctcggggtgtgctcccgtcg
cctttagaagatagaaatccgagcaaagcggccggagccaatgccgaagaccaaatcttt
gggaaaacctacaagcgaggcaggcgggagagccctcgtatcagcaggttgaagtctgat
ggcaaaggccacggcgatgacccgtctccccgcggagagagcaacttccatggcgtcgat
tgcaacaagcgtcagaaaggaaagaagaggaaaagcggctgcctcctgggtcccgaagac
ttcatcaagaagaacggcagtgaccaggacaaggagcatcgaggagatcacgaggaacat
gcgacagctcggagcgttcactctgagatggataaagcgaccaatggacattccaacaat
caggactttgtcgttgccccactggggggagaggctgctcgcaatgtcctggcagaagat
gacgatcgctcaggggaggagcaatgcagagggcggcctgacccggagccctgcgtatcc
cttgctaaaagcaagagaaagctgaacagaaactctggaaagaggaaggtcaaaaaaacg
cccgggaaacagcccaggaaaggaaccaaacgtttgcagttggtgggtcagaacgaaatg
gagaggatacagctggcacaagccgaccccggcaggagtcccagcgatgcgaacgagatt
aaaatcgatagctttcccagcagcgaggagccagccaggaaggaacaggaagtgaggagc
accagaaggagcggcaggctcaagctcctggaccaggagctattgctgcatggaaataga
aggagcgggaagtctggttcatgcctcaagaccgccagaattccagagcccagtgaagag
agtgctgacgtgcgtagaccagacctggtgatcatggaaaccgggagctcacaactgcag
gaggtcctggttccaaagttaccagataacataaatcgagacaatccaccgccttgtgga
ttgtgtgagtttccgccggtccaacagcttaatcccactagtccagtaaaatcgttagaa
gtcgcacggcaaggctgtgatttaccatgtggagttgaacaccttctgggatctgattgc
tcttctgggactcaggccagcctgttgctgctcgccccccaacccgtgcacggagacctg
tgtgatgagctacgcgtgcagcctgaatgcgcaaaggaccgcaagctaagcgctggcggt
gtttccggtttatctgctgttccgcccggagacgagttagcggaggcgaccgaaaaaatg
accgtcgcttctgaaaccgaggtggctccagagaccgaagacagtgaggtggacacgcag
gctttgctgaagacgttcaggtcgaccaagcgaaagtcattcgttctgcagcccgtggac
aacagagctccttcagctgcaaagcccgtgcccaccagtggcgaacctgctgctgacttg
aaggaaacgagtgaaaggctggcggtaaggctggagcgtgccagagatttcaacgagagt
cgcaatgaggatgagaccgggtcccagaacgagcaggaagatgctctggtcaccagtaaa
gccaaagccaagctgccagtggttgagttgaacatcatgtcgcagcagtgccgcaggaca
gagggggaattccttgactttgtccctccaacctttggctcccctgtgatgcctccattc
ccgcagggcggtcagcagagggcgacgcctccatcaggaagcccaggcgcggcaactagg
agcagcaccaggtcaagcagaaggagagggtcgagcgacggtgttgtggccggtgtcact
gagagagaaacccttcgctctgaccgatcgagccaacgcaacagcctggttcctgccacc
ccgactagcgagcacggccagagcgttcaacaggccaacccagggttcccgtgtggagtg
gaggagatcactgtcggcacagaacttgcctgcagctccaaccctgagtccacgctgttg
ttttcagctaaaagtcaggcggtaacgggagaagggactcgactcaagtcgggatcgaaa
gccgacgaaatgtcagaaccaggagggttttgtaaccgaggtgagccatcccactcacaa
cgcaactttagggccaaagttggagacggagattcaacagaggatgaattagccgaccag
gctgaggtgacgaaggtggcctcccagctgaaggagagaaggtctccgctagcttcaccg
atgggctcctcaacccccgagggcctggtggaggagagagtgaaccaaggcggcctggag
aaagagggaggtgaagtgcagagcgagagccaagtgaggagagttgaggaactgctacac
tgcgaggacgaggagatggctgaaccaagtgagcggggcctggaggacagcggtgggcct
gctctggttgtcgggcggcggaagcgacctgttaaactctcttcttcgtcctcctccgga
tcggaattgagtgatgaggagctcccgtgcttccagatgtttgggtttaagaagtcggga
tcgaatgtcacatcagcgactcaaagtcccttaagcacagctcttgtgccttcgaaggac
acgctgggcaaaatcttttcaccgccgccgaagagcgacgcgggaattaaaaacacttgc
tcccaagtaaatgctgcgctagaggaattccgcgagaacttgctcagaaatcgatgcctc
tccccgagcgagtcgtcggaggaatctcccgacttgttctcctccgactctgactgttgt
tccaccccgtccggttcccaggccgagcagggggcgagcaacaagccggctcgggaacca
atcagttctgggagcaagaccaaaagagacgggaaaaggcggtcgtctcaagtggctaaa
atcgaaaagactttgcaaagaagagaagcctcagatcatcagcaatccagggagccaggg
gaggccgtgccagagcattcaggaggtgggcaagcggcttgctatgacagtgaagccagc
cacacaggggactctctctcttcggacagtgagctcctcaccacacagcagcgggacgca
atacagatcaacttaaagaagctgaaggaggagatggctgtgctagaggcagctctggag
caggacacagagcagcaggcaagccagaacaccgcgcacagcctttcccggagcccccag
gacacatccccggtgctgtctgaagacgagcagagcgcggtggcatcagtaactagagca
ggtgctggtcaggctctctcagaggctgctacgaatctgatcagcgaatcaaaatatgtt
gcggaaactattcccaccgagccagagtcacagcaggacaccagcctaatctttagggac
agagagcagaatgaatgccccgaatctcccgagtatgcggtgtccccttctctcaccgaa
cggcagatgaacagaatgccgttgacaaattggacagtggccggagcgctgggccgatcc
caatcggaaagaaactctcagggagaagacgtgggcattcctcatacaccaccacaacaa
gagagcagagcgagcgctgttacagcgggtcaggaagagctgggaggcgttgcaaagctg
cagaggtccaacggcaaagggaaggactgtggttcagaacagacagaagccgttggcagt
ttgcttgctgcctcgtcgaggtgccagccggcaccgggcacagccgccagcgcctgcaca
tcacaggtagcggacggggttggaaggccagaggcttcgtccgagggcttggagcagagc
aggtccctcctcacgtcatcgcccatcttcaacaaaagtgcagactctgccaccagcaag
agcccggctatgacaactcaaagaaaaatgtccttcgtggcttcaggcctggataaacat
gaaattctgttggttcagagatttgcagagaaaacaggaggtgccattaccagccagttc
ttacccagcacaacccacgtggtcatgagaacaggcacctcgctcgtctgtgagaggacc
ctgaaatacttccttggaatagctgggaggagatgggtaatcagttatcagtggatattg
gagtgtttcaaagaaggcaggataattgaggagagcgagtttgaggtgcgaggcgatgtg
atcaatggaagaaaccaccagggtcccagaaaagccaggcaaacctccaatggacaactc
ctgctcacagattacgaggtttgctgttggggctcatttaccgggatgagcaaagatcag
ctggagtggatggtggatctctgcggtgcctccatcgctaaggaaccttatttattcacc
tacaaccccggccgagtgtctgtggtggtggtgcagcctgacgctaacccagcaagcacc
gactatagagggatggagcgcaggttcagtgctgcggtggtgacccgggagtgggtcttg
gacagcgtggcttgttattgctgtcatccgctggaagcttacctgctcggctctccgcgc
tga
DBGET
integrated database retrieval system
