Callorhinchus milii (elephant shark): 121851696
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Entry
121851696 CDS
T03088
Name
(RefSeq) LOW QUALITY PROTEIN: integrator complex subunit 4-like
KO
K13141
integrator complex subunit 4
Organism
cmk
Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmk03041
]
121851696
Spliceosome [BR:
cmk03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
121851696
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
INTS4_8HBD
HEAT
HEAT_2
PDS5
Adaptin_N
Cnd1
Vac14_Fab1_bd
SCD
Cohesin_HEAT
VPS15-like_hel
DUF445
Motif
Other DBs
NCBI-GeneID:
121851696
NCBI-ProteinID:
XP_042201707
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
LQPHEEIPAKKLRLTKPSKSAALHIDLCKSSSPTEALQYLLQFSKKPVEAESVEGVVRIL
LEHYYKENESSVRLKIASLIGLLSKTPGFAADSIVDEVIIALSNEKSHQVLAQLVDALPG
HRENSSQENLPVSYRLVEIACKHLTDTSHVVRNKCLELVGCLGLLEKPVGKEMENLAARD
VQKIITDYFTDQDPRVRTAAMKAMLQLHERGMRLQQTIYCQVCQALSDDYEQVRSVAVQL
VWVLSQLYPDSIVPIPSSNEEIRLVDDTFGKVCHLVNDGSWLVRVQAAKLLGSMNQVSVQ
FLEQTLDKKLMSDLKEPVNTYTVNLINSGACGAFVHGLEDEMYEVRLAAVESLCTLGQAS
ASFAEKCLDFLVDMFNDEIEEVRLGSIHALRHISSHIRLREDQLDTVLAVLEDSSRDIRE
ALHELLCYTNVSTKDGIHLALVELLKNLAKYPXDRNSIWKCLKYLGSRHPTLVLPLVPEL
LSTHPYFDTPEPDMDDPAYIAVLVLVFNAAKTCPTMSALFSDHTFRHYAYLRDSLSHLVP
PLQVIAGRKTLVSDSSSLALSEDSSRQFVQKSLDRVQSIQHLDAHGSQDLLKLTTRDLQR
LGELQPELAGIAEFSATYLQCQLLLMKSLQEKLWNVAAPLYLKQNAMASAAAKQVLAYTY
ELEFLYSGLESRQLVIIHHVRLQAKALQLILSACTTRGMEILLNMCEKFLQELEAFTRCF
AVELQQLQGGFVERLLDVMPRLVACKPTEMVKILQTTLRQSAFLHLQLPEQVHRASATII
EPTGESDNPLRFTTGLVAVLELDATLQHVSDPPNSIKVQVVYPDGQAHIIHPKASDFRNP
GPGRHRLITEVYLSHTAWTEPCQVEVRLLLAYSASGSRGGAGARPAWGDSVDGLPQTDTT
IEGTINLSKPVKVYLMPKPARR
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaccacacgaagagattcccgccaaaaagcttcgcctgacaaaacccagcaagtct
gcggctcttcacatcgacctgtgcaaatccagcagccccaccgaggccctgcagtacctg
ctgcagttctccaagaaacctgtggaggccgagagcgtggagggtgtcgtccgcattctg
ctggagcattattataaggagaacgagagttcggtcagactgaagatcgcctccctgatc
ggcctcctgtctaaaactcccggcttcgcagccgacagcattgtggatgaggtcatcata
gccctcagcaatgagaagtctcaccaggtcctcgcacagttagtggacgctctccctggt
catcgggaaaacagctcccaagaaaacctgcctgtctcttatcggctggttgagatcgcc
tgtaagcacctgacggacacgtctcatgtagtgaggaacaagtgcctggagctggtgggc
tgtttgggtttactggagaagccagtggggaaagagatggaaaacctggcagccagggac
gttcagaagatcatcaccgattacttcaccgaccaggaccctcgtgttcgcaccgcagcc
atgaaggcaatgttgcagttgcacgagcgaggaatgaggttacagcagacaatctactgc
caggtttgccaggcactgtctgatgattatgagcaggtgcggtctgtggcagtgcagctt
gtgtgggtcctgagtcagctgtaccctgacagcatcgtccccattccctcctccaacgag
gaaatccggctagtggacgacactttcggaaaggtttgtcacctggtgaacgatgggtcc
tggttggtccgagtacaggctgctaaactactgggatccatgaaccaggtcagtgtgcag
ttcctggagcagactctcgacaagaaactgatgtccgacctgaaggagccggtcaacact
tataccgtcaatctcatcaactcgggggcctgcggggccttcgtgcacgggctggaggac
gagatgtacgaggtgcggctggctgcggtggagtctctctgtacgctgggccaggcctcc
gcctccttcgctgagaagtgcctggacttcctggtggacatgttcaacgacgagattgag
gaggtgcgtctgggctccatccacgccttgcgccacatctccagccacatccgtctgcgg
gaggaccagctggacaccgtgctcgccgtcctggaggattcctcccgggacattcgtgag
gccttgcatgagctgctgtgctacaccaacgtgtccaccaaggacggcatccacctggcg
cttgtggagctgctgaaaaacctggccaagtatccgnacgacaggaattccatctggaaa
tgcctcaagtaccttgggagccggcacccgaccctggttctccccctcgtacccgagttg
ctgagcacacacccgtacttcgatactccagagccagacatggacgacccagcctatatc
gcggtgttggtgctggtgttcaacgcagccaagacttgccccaccatgtccgcgctcttc
tccgaccacacgtttcggcactacgcctacctgcgggacagcctctctcacctggtgccc
ccgctgcaggtcattgccgggagaaagaccttggtgtcggattccagcagcctggctctg
agtgaggactcctctcggcagtttgtacagaagagcctggaccgagttcaaagcattcag
cacctggatgcacacgggtcccaggacctcctgaaactcaccacacgggacttgcagaga
ctgggagagctgcagccggagctggcagggattgctgaattctctgccacctacctgcag
tgccagctcctgctcatgaagtcgctacaggagaagctgtggaacgtggcagctccgctc
tacctgaagcagaacgctatggcgtcagccgctgccaaacaggtcctggcctacacatac
gagctggagttcctgtacagtgggctggagagccggcagctcgttatcattcaccacgtg
cggctccaggctaaagccttgcagctcatcctgagcgcttgcaccaccagaggcatggaa
atcctcctgaacatgtgtgagaagttcctccaggagctcgaggcattcacaaggtgtttt
gctgtggagctgcagcagttacagggggggtttgtggagcggctgttggatgtgatgccg
cggctcgtggcctgtaaacccaccgagatggtgaagatcctgcagaccaccctgcggcag
agcgccttcctgcacctccagctcccagagcaggttcaccgggcgtcagccaccatcatc
gagcccacgggagagtctgacaatcctctgcggttcaccacagggctggtggctgtgctg
gagctggatgccacactacagcacgtgagtgacccccccaactccatcaaggtgcaggtt
gtgtatcccgacggccaggcccacataatccatcccaaagcgtccgatttccgcaatcct
gggcccggcagacaccgattgattaccgaggtctatctctctcacacagcctggacagag
ccctgccaggtggaggtgcgactgttgttggcgtacagtgcaagcggcagccggggaggg
gctggggccaggccggcctggggggacagtgtggacggactcccccagacagacaccacc
atcgagggcaccatcaacctcagcaaacccgtcaaggtctacctgatgcccaaaccagcc
aggcgctga
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