Chlamydia muridarum Nigg 2 MCR: BB17_02235
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Entry
BB17_02235 CDS
T03206
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cmn
Chlamydia muridarum Nigg 2 MCR
Pathway
cmn03030
DNA replication
cmn03410
Base excision repair
cmn03420
Nucleotide excision repair
cmn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BB17_02235
03410 Base excision repair
BB17_02235
03420 Nucleotide excision repair
BB17_02235
03430 Mismatch repair
BB17_02235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmn03032
]
BB17_02235
03400 DNA repair and recombination proteins [BR:
cmn03400
]
BB17_02235
Enzymes [BR:
cmn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BB17_02235
DNA replication proteins [BR:
cmn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BB17_02235
DNA repair and recombination proteins [BR:
cmn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BB17_02235
NER (nucleotide excision repair)
GGR (global genome repair) factors
BB17_02235
MMR (mismatch excision repair)
DNA ligase
BB17_02235
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BB17_02235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
HHH
Nlig-Ia
PTCB-BRCT
HHH_3
BRCT_2
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
AID37946
LinkDB
All DBs
Position
484205..486187
Genome browser
AA seq
660 aa
AA seq
DB search
MRALSQDYYIALCTELIEHDRRYYVLDRPTISDYSYDMKMRELQKIEAQHPEWKVPWSPT
IYLGDRPSGQFPVVPHSHPMVSIANVYSLEELEEFFSRTEKLLGYFPTYSLELKIDGIAV
AIRYENRTFAQALSRGNGVKGEDITANVSTIRSLPMTLPQDAPEEVEVRGEVFLSYQAFE
KLNICQREQGKLEFANPRNAAGGTLKLLSSREAAKRNLDLSIYGLITNREEHSHFENLGL
CAHWGFPIAGMPKQCRTKEEVIERIREVEGMRSRLPMAIDGVVVKVDSVAEQHRLGLTSK
HYRWAIAYKYAPERAETILQDITVQVGKTGILTPVAELTPVLLSGSRVSRASLYNEDEIE
KKDIRIGDSVYVEKGGEIIPKIVGINLAKRSPDSKPWKMPSLCPMCHNPVIKERVSVRCT
NPLCLGGMLEKICFFASKGALNIDHLGEKVIAKLFEMGLIRSCSDVFALTENDLKQVPGF
KDRSVHNLLASIAGAKEVTLDRFLTALSIPFVGSSGAIALADHFGTLDKVMKASLDELLS
IEGIGQKVAASIIDFFSKTENVEEICRMQELGVRILPKQVDRWAPLQGKIFVLTGTLQEM
TRLQAEERIRSLGGKISSSVSKNTYAVVVGREAGSKLKKAQELGVQVLEESDLLKILNQN
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgagagctttgtctcaagactattatattgctttatgtacagagttgatagagcatgat
cggcgttattatgtgttggatcgacctacaatttctgattacagttatgatatgaagatg
cgagagcttcaaaaaatagaagctcaacatccggagtggaaggtgccttggtcgccaacc
atttatttgggagatcgtccttctggtcagtttcctgtagttcctcattcacatcctatg
gtgtctatagcgaatgtgtactctttagaggaattagaggaatttttttcccggacagaa
aagctgcttggttatttccctacatattctttagaactcaaaattgatggaatcgctgtt
gcgattcgttatgaaaacaggacgtttgctcaggctttgagcagaggaaatggagttaaa
ggggaagatattacagctaacgtaagtacgatacgttctttgcctatgactcttcctcaa
gatgcaccagaagaggtagaggttcgaggagaggtatttctttcataccaggcttttgag
aagctcaatatttgtcagcgagaacaagggaaattagaatttgcgaatcctcgcaatgct
gctggagggactcttaagctgttgtcttctagggaggcagctaaaaggaatctggactta
tccatttatggactcatcacgaatcgtgaagagcattctcactttgaaaatcttggtcta
tgtgctcattggggatttcctatcgcaggcatgcctaaacagtgccgcacgaaagaagag
gttatagaacgcatacgagaagttgaaggaatgcgatcgcggcttcccatggccatagat
ggggtggtcgttaaggtcgatagtgttgccgagcagcatcgtttaggattgactagcaag
cattatcgttgggcgatagcctacaaatatgctccggaaagagcagaaaccattttacaa
gatattaccgtgcaggttggtaaaacagggattttaactccagttgccgaactaactccc
gttttgctgtctgggagccgagtgtctagagcatctctatacaacgaggatgaaatagag
aagaaggacattcgcataggagattctgtttacgtagaaaaaggtggagaaattatccct
aaaatcgttgggattaatttagctaagcgttctcctgatagtaaaccttggaaaatgcca
agcctatgtcctatgtgccataatccagtcattaaagaaagagtgtctgttcgttgtaca
aaccctctttgccttgggggaatgttagaaaagatttgtttctttgcaagtaagggagct
ttgaatattgatcatttaggcgagaaggttatagccaaattatttgaaatggggctgatt
cgttcttgttccgatgtgtttgcgcttacagaaaatgatttgaagcaggttccaggattt
aaggaccgttctgtccacaatttattagcgagtattgcaggagccaaagaagtgactttg
gatcgatttttgacagcgctttccataccttttgtagggagttctggggctatagctcta
gcggaccattttggaactttagataaagtaatgaaagcttccttggatgaattactctct
atagaaggtattggtcaaaaagttgcagcgtctatcatagatttcttttctaaaactgag
aatgtagaagagatttgtcgtatgcaagagttgggggttcgcattcttcctaaacaggta
gatagatgggcccctttacagggtaagatttttgttcttacagggactcttcaggagatg
acgcgattacaagccgaggagcgtattcgttcgttaggaggaaagattagttcttctgta
tcgaagaatacctatgctgtagttgtgggaagagaagctgggtctaagttaaaaaaagct
caggaattaggggtgcaggttctagaagaaagtgatttgttaaaaattcttaatcaaaac
tag
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integrated database retrieval system
