KEGG   Cucumis melo (muskmelon): 103495970
Entry
103495970         CDS       T03195                                 
Name
(RefSeq) DNA repair protein RAD16
  KO
K15083  DNA repair protein RAD16
Organism
cmo  Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmo03400]
    103495970
DNA repair and recombination proteins [BR:cmo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NER4 complex
      103495970
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C zf-C3HC4 ResIII zf-RING_UBOX zf-RING_5 zf-C3HC4_2 zf-C3HC4_3 zf-RING_2
Other DBs
NCBI-GeneID: 103495970
NCBI-ProteinID: XP_008455894
UniProt: A0A1S3C1J5
LinkDB
Position
11:complement(10865868..10873579)
AA seq 870 aa
MKLRPRKPASNVLIEEGNVDGDSSDDIDVSDCGSEDHSSSSEDFSEHSTKKSRARTQKKR
IKKDGPSIEQEVGSNVGNDENLNNQKPEIADSQGVVEIEKPKTKYSRKKPKPTLLWNIWE
EEYERWIDENIEKDFDLANQNEVLAESVETPAALTMPLLRYQKEWLAWALKQEDSSIKGG
ILADEMGMGKTIQAIALVLAKRQLSGTAGLRRPSSNPSSSKELPLIKATLVICPVVAVSQ
WVSEIDRFTSEGSYKVLVYHGPKRVRSLEILSEYDFVITTYSVVEADYRKYLMPPKDRCP
YCSKLFHKKNLKFHLMYICGPDAVKTEKQSKQQRKRPIQPQICKQEKSDKDKNNNVHKSG
AQKSTLGQTLGEHENDEKPRGNSILHSVIWDRVILDEAHFIKDRLSNTAKAVLAISSSFR
WALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSPTCPNCPHKRVRHFCW
WNKNITQRIQNFGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSTVSIRRDTL
DIQEEDFYESLYNDSRAKFNTFVAAGTVTSNYAHIFDLLIRLRQAVNHPYLVVYSKTKAI
NSGNIDDSDSNNKQVCGLCHEPAEEPVDTSCKHAFCKACIIDYAGDFSKPVSCPSCSKML
TSDFITSMAFKDQTVKNTIKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFERDGSAK
GIVFSQFTSFLDLINYSLSKSGITCVQLVGSMSLTQRADAINRFIEDPDCKIFLMSLKAG
GVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRIMRFFIENSIEERILKLQE
RKELVFEGTVGRSNEALGRLTLDDMRYLFL
NT seq 2613 nt   +upstreamnt  +downstreamnt
atgaagcttcgtccccgtaaacccgcctccaatgtattgatcgaagaaggaaacgtagac
ggagattcctctgatgatattgacgtgtccgactgtggaagtgaagatcattcttcgagt
tctgaggacttcagcgagcattcaacaaagaagtctagagcaaggacacagaaaaaacgt
attaaaaaggatggacccagcattgagcaggaagtgggaagcaatgtaggcaatgatgaa
aacctaaacaatcagaaaccagaaattgctgactcccagggtgtggtcgaaatagagaag
ccaaagaccaagtactcaagaaagaagccaaaacctacccttttgtggaatatatgggag
gaagaatatgagagatggattgatgaaaacattgaaaaagattttgatttggctaatcag
aatgaagtattggctgaatctgttgaaacacccgctgcgcttacgatgcccctgctacgg
taccagaaagagtggctagcttgggcactgaagcaggaagattcttcaattaaaggtggg
atacttgcagatgaaatgggaatgggaaaaaccatccaagctattgcgctggtacttgct
aaacgtcagctctctggaactgctggattgagaagaccctcatcgaatccaagttcttcc
aaggaattgcctttgatcaaagcaactcttgtgatatgtcctgttgttgctgtgagccaa
tgggtaagtgagattgatcgtttcacatcagagggaagttacaaggtgcttgtgtatcat
ggtccaaaacgagtgcggagtcttgagattttatcagaatatgattttgttattaccaca
tactctgttgtcgaggctgattacaggaaatatctgatgcctcccaaggataggtgccct
tactgtagtaaactatttcataagaagaatttgaagtttcacttgatgtacatttgtggg
cctgatgctgttaaaacagagaagcagtctaagcaacaaagaaaaaggcctatacagcct
caaatatgtaaacaggagaaatctgataaagataagaacaataatgttcacaagagtggc
gcccagaaaagcactcttggacagacattgggggagcatgagaatgatgaaaaacctcgt
gggaattcaatattgcattctgtgatatgggaccgtgtcattttggatgaggcacatttc
ataaaagataggctgtctaatactgcaaaagctgttcttgcaatttcttcttcatttaga
tgggctttaagcggcacacctattcagaatcgcgttggagagctttactctcttgttcgc
ttcctgcaaattgtcccctattctttctacttttgtaaggactgtgattgtagaacactc
gatcatagttctcctacctgtcctaactgccctcataaacgtgtgcgacatttttgctgg
tggaacaagaatattactcaacggattcaaaattttgggagaggtccagagtttaaaaga
gggatgatattgctgaagcataagattttaagtagcattgtacttcgacgcaccaaaaag
ggtagagctgctgatctggctcttcctccaagtactgtttcaattaggcgagataccctt
gacattcaagaagaagacttttatgaatcattgtataatgatagtcgagcaaaatttaat
acttttgttgcagctggaacggtaacaagtaattatgcacacatatttgacctattgatt
cgcttgagacaggcagttaatcatccatatctcgtggtgtattctaaaactaaggccata
aatagtggaaacattgatgattctgatagtaataacaaacaagtatgtggactttgtcat
gagccagcagaagaacctgtggatacctcttgcaagcacgcattttgtaaggcctgcata
attgattatgccggtgatttttcgaagcctgtctcatgtccttcttgctcaaagatgctc
accagtgactttatcacaagtatggcttttaaagatcaaactgttaaaaatacaatcaag
gggtttaaatcttcaagtattcttaacagaatacagctggagaattttcagacgagcaca
aaaatagaagctttgagagaagaaattagattcatgtttgaacgagatggttctgccaaa
ggaattgtttttagccaattcacgtcatttttggatctcataaactattccttgtccaag
tctggtattacctgcgttcaattagttggaagcatgtcgttgactcaaagagccgatgct
attaatagattcattgaggatccagattgtaagatttttctaatgagcttgaaagcagga
ggggttgccctcaatctcactgtggcatcacatgtcttcatcatggacccttggtggaat
cctgctgtggaaaggcaagcacaagatagaattcatcgaattgggcaatataaacctatc
agaattatgagattttttattgaaaactccatcgaggaaaggattttgaagctacaagag
aggaaagaactggtatttgaaggaactgtaggtcgctctaatgaggccttgggaagatta
accttggatgacatgagatacctgtttctttga

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