Cucumis melo (muskmelon): 103495970
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Entry
103495970 CDS
T03195
Name
(RefSeq) DNA repair protein RAD16
KO
K15083
DNA repair protein RAD16
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmo03400
]
103495970
DNA repair and recombination proteins [BR:
cmo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
103495970
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-C3HC4
ResIII
zf-RING_UBOX
zf-RING_5
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
103495970
NCBI-ProteinID:
XP_008455894
UniProt:
A0A1S3C1J5
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Position
11:complement(10865868..10873579)
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AA seq
870 aa
AA seq
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MKLRPRKPASNVLIEEGNVDGDSSDDIDVSDCGSEDHSSSSEDFSEHSTKKSRARTQKKR
IKKDGPSIEQEVGSNVGNDENLNNQKPEIADSQGVVEIEKPKTKYSRKKPKPTLLWNIWE
EEYERWIDENIEKDFDLANQNEVLAESVETPAALTMPLLRYQKEWLAWALKQEDSSIKGG
ILADEMGMGKTIQAIALVLAKRQLSGTAGLRRPSSNPSSSKELPLIKATLVICPVVAVSQ
WVSEIDRFTSEGSYKVLVYHGPKRVRSLEILSEYDFVITTYSVVEADYRKYLMPPKDRCP
YCSKLFHKKNLKFHLMYICGPDAVKTEKQSKQQRKRPIQPQICKQEKSDKDKNNNVHKSG
AQKSTLGQTLGEHENDEKPRGNSILHSVIWDRVILDEAHFIKDRLSNTAKAVLAISSSFR
WALSGTPIQNRVGELYSLVRFLQIVPYSFYFCKDCDCRTLDHSSPTCPNCPHKRVRHFCW
WNKNITQRIQNFGRGPEFKRGMILLKHKILSSIVLRRTKKGRAADLALPPSTVSIRRDTL
DIQEEDFYESLYNDSRAKFNTFVAAGTVTSNYAHIFDLLIRLRQAVNHPYLVVYSKTKAI
NSGNIDDSDSNNKQVCGLCHEPAEEPVDTSCKHAFCKACIIDYAGDFSKPVSCPSCSKML
TSDFITSMAFKDQTVKNTIKGFKSSSILNRIQLENFQTSTKIEALREEIRFMFERDGSAK
GIVFSQFTSFLDLINYSLSKSGITCVQLVGSMSLTQRADAINRFIEDPDCKIFLMSLKAG
GVALNLTVASHVFIMDPWWNPAVERQAQDRIHRIGQYKPIRIMRFFIENSIEERILKLQE
RKELVFEGTVGRSNEALGRLTLDDMRYLFL
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttcgtccccgtaaacccgcctccaatgtattgatcgaagaaggaaacgtagac
ggagattcctctgatgatattgacgtgtccgactgtggaagtgaagatcattcttcgagt
tctgaggacttcagcgagcattcaacaaagaagtctagagcaaggacacagaaaaaacgt
attaaaaaggatggacccagcattgagcaggaagtgggaagcaatgtaggcaatgatgaa
aacctaaacaatcagaaaccagaaattgctgactcccagggtgtggtcgaaatagagaag
ccaaagaccaagtactcaagaaagaagccaaaacctacccttttgtggaatatatgggag
gaagaatatgagagatggattgatgaaaacattgaaaaagattttgatttggctaatcag
aatgaagtattggctgaatctgttgaaacacccgctgcgcttacgatgcccctgctacgg
taccagaaagagtggctagcttgggcactgaagcaggaagattcttcaattaaaggtggg
atacttgcagatgaaatgggaatgggaaaaaccatccaagctattgcgctggtacttgct
aaacgtcagctctctggaactgctggattgagaagaccctcatcgaatccaagttcttcc
aaggaattgcctttgatcaaagcaactcttgtgatatgtcctgttgttgctgtgagccaa
tgggtaagtgagattgatcgtttcacatcagagggaagttacaaggtgcttgtgtatcat
ggtccaaaacgagtgcggagtcttgagattttatcagaatatgattttgttattaccaca
tactctgttgtcgaggctgattacaggaaatatctgatgcctcccaaggataggtgccct
tactgtagtaaactatttcataagaagaatttgaagtttcacttgatgtacatttgtggg
cctgatgctgttaaaacagagaagcagtctaagcaacaaagaaaaaggcctatacagcct
caaatatgtaaacaggagaaatctgataaagataagaacaataatgttcacaagagtggc
gcccagaaaagcactcttggacagacattgggggagcatgagaatgatgaaaaacctcgt
gggaattcaatattgcattctgtgatatgggaccgtgtcattttggatgaggcacatttc
ataaaagataggctgtctaatactgcaaaagctgttcttgcaatttcttcttcatttaga
tgggctttaagcggcacacctattcagaatcgcgttggagagctttactctcttgttcgc
ttcctgcaaattgtcccctattctttctacttttgtaaggactgtgattgtagaacactc
gatcatagttctcctacctgtcctaactgccctcataaacgtgtgcgacatttttgctgg
tggaacaagaatattactcaacggattcaaaattttgggagaggtccagagtttaaaaga
gggatgatattgctgaagcataagattttaagtagcattgtacttcgacgcaccaaaaag
ggtagagctgctgatctggctcttcctccaagtactgtttcaattaggcgagataccctt
gacattcaagaagaagacttttatgaatcattgtataatgatagtcgagcaaaatttaat
acttttgttgcagctggaacggtaacaagtaattatgcacacatatttgacctattgatt
cgcttgagacaggcagttaatcatccatatctcgtggtgtattctaaaactaaggccata
aatagtggaaacattgatgattctgatagtaataacaaacaagtatgtggactttgtcat
gagccagcagaagaacctgtggatacctcttgcaagcacgcattttgtaaggcctgcata
attgattatgccggtgatttttcgaagcctgtctcatgtccttcttgctcaaagatgctc
accagtgactttatcacaagtatggcttttaaagatcaaactgttaaaaatacaatcaag
gggtttaaatcttcaagtattcttaacagaatacagctggagaattttcagacgagcaca
aaaatagaagctttgagagaagaaattagattcatgtttgaacgagatggttctgccaaa
ggaattgtttttagccaattcacgtcatttttggatctcataaactattccttgtccaag
tctggtattacctgcgttcaattagttggaagcatgtcgttgactcaaagagccgatgct
attaatagattcattgaggatccagattgtaagatttttctaatgagcttgaaagcagga
ggggttgccctcaatctcactgtggcatcacatgtcttcatcatggacccttggtggaat
cctgctgtggaaaggcaagcacaagatagaattcatcgaattgggcaatataaacctatc
agaattatgagattttttattgaaaactccatcgaggaaaggattttgaagctacaagag
aggaaagaactggtatttgaaggaactgtaggtcgctctaatgaggccttgggaagatta
accttggatgacatgagatacctgtttctttga
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