Cucumis melo (muskmelon): 103497632
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Entry
103497632 CDS
T03195
Name
(RefSeq) ABC transporter I family member 19-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103497632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmo03019
]
103497632
Messenger RNA biogenesis [BR:
cmo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103497632
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ORC-CDC6-like
AAA_29
nSTAND3
AAA_23
AAA_28
AAA
AAA_5
NACHT
AAA_15
AAA_18
AAA_30
AAA_24
SRP54
Rad17
AAA_16
PduV-EutP
AAA_33
AAA_25
ATP-synt_ab
AAA_22
Arf
AAA_14
Zeta_toxin
AAA_7
Motif
Other DBs
NCBI-GeneID:
103497632
NCBI-ProteinID:
XP_008458101
UniProt:
A0A1S3C715
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All DBs
Position
1:complement(27389438..27394482)
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AA seq
307 aa
AA seq
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MADNGISLVGNDGIEVVDEKGSPGIKVQAMQFSYESDSPLFVEFNLQIGSGSRCLLVGAN
GSGKTTLLKILAGKHMVGGRDVVQVLNGSAFHDTQLVCSGDLAYLGGSWSKTVSSAGEVA
LQGDFSAEHMIFGVEGTDPERRERLIDLLDIDLRWRMHKVSDGQRRRVQICMGLLHPFKV
LLLDEVTVDLDVVARMDLLDFLKEECDQRGATIVYATHIFDGLETWATHLAYIQDGELRK
SEKLSAVEELKTCANLLSVVETWLRAETKLEKKKKKQPIQPPSNNQKIVSPFGSSPFTSS
RHMAYYR
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacggaatatctcttgtcgggaatgatggtattgaagttgtagatgagaaa
ggttcccccggcatcaaggtacaagcgatgcaattctcttatgaaagtgattctcctctt
tttgtcgagtttaatctccagattggctctggatctcgatgtcttcttgttggcgccaat
ggatctgggaagacgactttgctgaaaattttggctggaaaacatatggttggaggaaga
gatgttgtccaggttttaaatggttcagcttttcatgacactcaactcgtatgtagtggt
gacttggcctacttgggaggatcttggagtaaaaccgttagctctgcgggagaggttgca
ttacagggagatttttctgccgagcatatgatatttggagttgaagggacggatcctgaa
aggagagagaggttaattgacctccttgatatagatctccggtggcgaatgcacaaggta
tctgatgggcaacgtcgtagggtgcaaatctgcatgggcctgttacatcctttcaaggtt
ctcttattagatgaggtcacggttgaccttgatgtcgtcgcaaggatggaccttctggac
ttcttgaaggaagagtgtgatcagaggggagctacaattgtatatgcaactcacatattt
gatggactggagacatgggcaactcatctagcatatattcaagatggtgagctaagaaag
tcggagaagttatccgcagttgaagagttgaagacttgtgcaaatttgctatctgtggtt
gagacttggctgcgtgctgaaaccaaacttgagaagaagaagaagaagcaaccaattcaa
cctccatccaacaatcagaagattgtttctcctttcggttcgtctcctttcacgtcttcc
agacatatggcttattatcgttag
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