Cucumis melo (muskmelon): 103501708
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Entry
103501708 CDS
T03195
Name
(RefSeq) ABC transporter I family member 20 isoform X1
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103501708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmo03019
]
103501708
Messenger RNA biogenesis [BR:
cmo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103501708
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
Motif
Other DBs
NCBI-GeneID:
103501708
NCBI-ProteinID:
XP_008463596
UniProt:
A0A1S3CL69
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Position
12:14846857..14849668
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AA seq
332 aa
AA seq
DB search
MPSSDPTIVIDRLRFTYPGIDGHPPPCSKPLIENFSLTLNSGDRCLLVGSNGAVFVSVSG
KTTILKILGGKHMVEPHMVRVLGRSAFHDTALTVSGDLCYLGGEWRRDMAFAGFDVPIQM
AVSAEKLIFGVGGVDPKRRVELINILDIDLSWKMHKVSDGQRRRVQICMGLLKAYKVLLL
DEITVDLDVLARANLLKFLRRECEERGATIIYATHIFDGLEDWPSHMVYVSHGKLQISMP
MDKIKEISKLSLMRTVESWLRKERDEERLRRRERKANGLPEFEERIEESRVTGDPARSAV
RVINNGWAAGRLNSTVAGEENFLFSSNRVLRQ
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgccttcttccgatcccaccatcgtcatcgaccgcctccgattcacttaccctggaatc
gacggccaccctcctccctgttccaaaccccttattgaaaatttctccctcaccctcaac
tctggtgatcgttgccttcttgtcggatccaatggcgctgttttcgtttccgtctcaggg
aagaccacgatcttgaagattttgggagggaagcatatggtggagcctcatatggttcgt
gtgcttggaaggtcggcttttcatgatactgctttgactgtttctggtgatctttgttat
cttggaggagagtggaggagagacatggcctttgctggatttgacgttcccattcaaatg
gctgtatctgcagagaaactaatttttggagtaggtggggttgatccaaaaaggagagtc
gaactcattaatattttagacattgatctatcatggaagatgcacaaggtatctgatggt
cagagaagacgggtgcaaatatgcatgggtcttctcaaggcatacaaggttcttcttctt
gatgagataactgtggatcttgatgtgctggcaagggctaatcttttgaaatttttgaga
agggaatgtgaggaacgaggggctacaataatttacgccacgcatatatttgacggtctt
gaagattggccatcacacatggtctatgtatcgcatgggaagttgcaaatctccatgcca
atggacaaaattaaagagatcagcaaattatctcttatgagaacggttgagagttggcta
aggaaggagcgggatgaggagcgactgaggaggagggaaagaaaggcaaatggtctgcct
gaatttgaagaaaggatagaggaaagccgtgtgactggagatccagctcgctctgctgtt
cgagtaataaacaacggttgggccgcaggacggcttaactccactgtcgctggagaagag
aacttcctgttcagctctaacagagttctcagacagtaa
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