Campylobacter molothri: CMOL_0284
Help
Entry
CMOL_0284 CDS
T10922
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cmol Campylobacter molothri
Pathway
cmol03030
DNA replication
cmol03410
Base excision repair
cmol03420
Nucleotide excision repair
cmol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CMOL_0284 (ligA)
03410 Base excision repair
CMOL_0284 (ligA)
03420 Nucleotide excision repair
CMOL_0284 (ligA)
03430 Mismatch repair
CMOL_0284 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmol03032
]
CMOL_0284 (ligA)
03400 DNA repair and recombination proteins [BR:
cmol03400
]
CMOL_0284 (ligA)
Enzymes [BR:
cmol01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CMOL_0284 (ligA)
DNA replication proteins [BR:
cmol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CMOL_0284 (ligA)
DNA repair and recombination proteins [BR:
cmol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CMOL_0284 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CMOL_0284 (ligA)
MMR (mismatch excision repair)
DNA ligase
CMOL_0284 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CMOL_0284 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
PTCB-BRCT
HHH_2
BRCT_2
Nlig-Ia
HHH_5
N-glycanase_N
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
ULN99469
LinkDB
All DBs
Position
271395..273335
Genome browser
AA seq
646 aa
AA seq
DB search
MTKEDYLRKVALANEWMKAYYEKDEPLASDEEYDALIRELKTFESQNENDISPNSPTQKI
APTIQSEFKKITHLSRMWSMEDVFNEEELRAWAKRAKCENNFFIEPKFDGASLNLLYENG
KLISGATRGDGELGEDITLNVFEIDNIPKTISYKEKIEIRGEVVILKDDFEKINEKRAQL
NQSLFANPRNAASGSLRQLDTRITKERNLKFYPWGVGENSLNFKKHSEIMNFIRELGFLK
DDFVRLCKDLDEVLFSYKELLSLRDQKPMMMDGMVVRVDDLILCKELGYTVKFPKFMAAF
KFPALEKTTRLIGINLQVGRSGVITPVAVLEPVNLDGVVVKSATLHNFDEIERLDVKIND
FVSVIRSGDVIPKITKVFKERRDGLELNVSRPKFCPTCQSELLDEGTLIKCQNIDCTDRL
LNSIIHFVSKKCLNIDGLGENIIELLYKNKKIKTIESIFSLKYKDFEDLEGFKQKKINNI
LNAIDNARECELFRFITALGIEHIGEVAAKKLSSNFGLDWYKQNFESYLNLEGFGEQMAT
SLCEFTRVNQTRICEFYHILKLKVEQLEIKDDSIILGKTFVITGTLSKSRDHFKNLIEKL
GGKVSSSVSKKTDFVLFGEEAGSKLHKAKELGIKCINESDFQELIK
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagaagattatttaagaaaagtagctttagccaatgaatggatgaaggcttat
tatgaaaaagatgagcctttggcaagcgatgaggaatatgatgctttaattagagaatta
aaaacttttgaaagtcaaaatgaaaatgatatttcacctaactcaccaacacaaaaaata
gctcctactatacagagtgaatttaaaaaaatcactcatctaagtcgtatgtggtccatg
gaagatgtttttaatgaagaagaattaagagcttgggcaaagcgtgcaaaatgtgaaaat
aatttttttatagagccaaaatttgatggagcgagcttaaatttactttatgaaaatggt
aaattaattagcggtgctacaagaggagatggagagctaggggaagatattacattaaat
gtttttgagattgataatattcctaaaacaatttcttataaagaaaaaatcgagattcgc
ggtgaagttgtgattttaaaagatgattttgaaaaaatcaacgaaaaaagagcccaatta
aaccaaagtttatttgcaaatccaagaaatgcagcaagtggaagtttaagacaacttgat
acgagaattactaaagaaagaaatttaaaattttatccttggggggttggtgaaaattct
ttaaattttaaaaaacatagcgaaattatgaattttatcagagaactaggttttttaaaa
gatgattttgttaggctttgtaaagatttggatgaggttttgttttcctataaagaactt
ttatctttaagagatcaaaaacctatgatgatggatggtatggtagttagagttgatgat
ttgatactttgtaaagagcttggttatacggttaaatttccaaaatttatggcagctttt
aaatttccagctcttgaaaaaacgacacgtttaatcgggattaatttacaagtaggaaga
agcggcgtgatcactcctgttgctgttttagagcctgtaaatttagatggggttgtggta
aaatctgccactttacataattttgatgaaattgaaagattggatgtaaaaatcaatgat
tttgttagtgttataagaagtggagatgttatacctaaaatcactaaggttttcaaagaa
agacgagatggtctggagcttaatgtttcacgtcctaagttttgccctacttgtcaaagt
gagcttttggatgaaggaacacttataaagtgtcaaaatatagattgtaccgatagactt
ttaaattcaatcatacattttgtttctaaaaagtgcttaaatatagatgggcttggtgaa
aatataatcgaacttttgtataaaaataaaaaaattaaaaccattgagagtattttttct
ttgaaatataaagattttgaagatttagaaggttttaaacagaaaaaaattaataatatt
ttaaatgctatagacaatgcaagagagtgtgaattatttcgtttcatcacagctttggga
attgaacatataggagaagtggcggctaaaaaattaagttcaaatttcggtttagattgg
tataagcaaaattttgaatcttatttaaatttagagggttttggagagcaaatggcgact
agtttatgtgaatttactcgtgttaatcaaactagaatttgcgagttttatcacatttta
aaattaaaagtagagcaattagagattaaagatgacagtattattttaggaaaaactttt
gtaataactggaacgctttctaaatcaagagatcattttaaaaatttaatagaaaaatta
ggtggaaaggttagtagctctgtatctaaaaaaacagattttgtgctttttggagaagag
gctggttctaaattacataaagcaaaagagcttggcatcaagtgtatcaatgaaagtgat
tttcaagaattaataaaatga
DBGET
integrated database retrieval system
