KEGG   Cucurbita moschata (crookneck pumpkin): 111440096
Entry
111440096         CDS       T05248                                 
Name
(RefSeq) RING-box protein 1a
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03420  Nucleotide excision repair
cmos04120  Ubiquitin mediated proteolysis
cmos04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111440096
   04120 Ubiquitin mediated proteolysis
    111440096
  09124 Replication and repair
   03420 Nucleotide excision repair
    111440096
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cmos04121]
    111440096
   03400 DNA repair and recombination proteins [BR:cmos03400]
    111440096
Enzymes [BR:cmos01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     111440096
Ubiquitin system [BR:cmos04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   111440096
  Multi subunit type E3
   SCF complex
    Ring finger protein
     111440096
   Cul2 complex
     111440096
   Cul3 complex
     111440096
   Cul4 complex
     111440096
   Cul7 complex
     111440096
   Cul8 complex
     111440096
   Cul9 complex
     111440096
DNA repair and recombination proteins [BR:cmos03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      111440096
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      111440096
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003
Other DBs
NCBI-GeneID: 111440096
NCBI-ProteinID: XP_022933228
UniProt: A0A6J1F460
LinkDB
Position
Unknown
AA seq 117 aa
MATLDSDVPMVPAGEASSSAGPSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 354 nt   +upstreamnt  +downstreamnt
atggctacgctggattcggatgtgcctatggttcctgctggtgaggcttcgagtagtgct
ggtccttcatcctccaagaaacctaagcgatttgagatcaagaagtggaatgctgtcgct
ctttgggcttgggatattgttgtcgataattgtgctatttgtaggaatcacataatggat
ctctgcattgaatgtcaggcgaatcaggcgagtgccactagtgaggaatgtactgtcgct
tggggggtatgcaaccatgcttttcacttccactgcattagtcgttggttgaagactcgc
caagtttgtccattggataacagcgaatgggagttccagaagtatggacattag

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