Cucurbita moschata (crookneck pumpkin): 111442611
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Entry
111442611 CDS
T05248
Name
(RefSeq) transcription factor PIF4-like
KO
K16189
phytochrome-interacting factor 4
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111442611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmos03000
]
111442611
Transcription factors [BR:
cmos03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
111442611
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
111442611
NCBI-ProteinID:
XP_022935813
UniProt:
A0A6J1FBK0
LinkDB
All DBs
Position
Unknown
AA seq
572 aa
AA seq
DB search
MPFGPFLTRSIAFAVEFSPFTEKSRTGSLPFSSFLSIQTRISSELFCVKAAAAMNYCFPD
WNFEGDLPSASHKKSMGHEHDDLVELLWRNGQVVLQSQKARKPSLIQKQSQPLDRTNISS
GISSTLIQDDETVSWIHDPLNDDSFDKEFCSEFFSELPQTRFGAFDAAAATTQNSKPPAV
LAELPTNTMPPPRYQCSDSIRQTKDLGDLGKMVNFSRVPVAVRGDLGSSNGGREAGNLIH
GEGKDCSATTVGSSHCGSNQVPNPEPNVSRVSTSGVGNAGLSVDLSNKKMAAQGERGKTE
TMDPTATSSSGGSGSSMDRSRTIGQSNGGNGNKRKGRDGEESECQSETAELESAEGNKAA
PRSGFPRRTRAAEVHNLSERRRRERINEKMKALQELIPHCNKTDKASMLDEAIEYLKSLQ
LQLQVMWMGNGMAPMMFPGVQHYMSRMAMGMGMAQPSMPSMPSIHNSMQLPRVSAVDQSV
SATPTPNQPTICQPQLFNPVNYQNQMSNPALQEQYARLMGFHHMQPSSQPINVFRFCPST
VLQSQTPAATGPASGPTFGGSIANDIVNGTLG
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgccttttggtccatttctcactcgctccatcgcatttgctgtggagttttctcctttc
acagagaaatcacgaacagggtcacttccattttccagctttctctcgattcaaactcgg
atttcttcagagcttttttgtgtcaaagcggcggcggccatgaattattgctttcctgat
tggaactttgagggtgatcttccttcagctagccataagaaatcaatgggacatgaacat
gatgatcttgtggagctgttatggagaaatgggcaagtggtcttacaaagccaaaaggct
agaaagccaagccttattcagaaacagagtcaaccacttgataggactaatatttcttct
ggaatttcaagcactttgattcaagatgatgagacggtttcgtggattcatgatccgctc
aacgacgattcgttcgacaaggaattttgttcggagttcttctccgaattgccacaaact
agatttggtgcctttgatgctgctgctgctactactcagaactctaagcctcctgcagtt
cttgctgagcttcctacgaacacgatgcctcctccgagatatcagtgttcggattcgata
cgacaaacgaaggatttgggagatttaggaaaaatggtgaacttttctcgagttcctgtg
gcagtgaggggtgatttgggatcatcaaatggagggagagaggctggaaacttgatacat
ggagagggaaaagattgttcagcaacgacggttggttcgagccactgtggaagcaaccaa
gttcctaatcctgaaccaaatgtgagccgagtttcgacgagtggcgtcgggaatgctggc
ttatctgttgatctctctaacaaaaagatggctgcacaaggtgagagggggaaaactgag
accatggatccaaccgctacttcgtcctcaggcggttcgggaagtagtatggatagaagt
agaacaattggacaatctaatggaggtaatggcaacaaaagaaaaggtcgagacggggaa
gaatccgagtgccaaagcgagactgctgaactagaatctgctgagggaaacaaggcagct
ccacggtcaggatttccgcgcaggactcgtgctgctgaagtacataacctttcggaaagg
agaagaagagaaaggataaatgaaaagatgaaagcactgcaagaactcataccacattgt
aataagaccgacaaagcttcaatgttagatgaagctattgaatatttgaagtcacttcaa
ttacaactacaggttatgtggatgggaaacgggatggcgccaatgatgtttcccggtgtt
caacattacatgtctcgaatggctatgggcatgggaatggctcaaccttcaatgccttca
atgccttcaattcacaactcaatgcaattacctcgggtctcggctgtcgatcaatcggtt
tcagcgactccgactccaaaccaaccgacgatatgccaacctcaacttttcaaccccgtg
aattatcaaaatcagatgtcgaatcccgctttgcaagagcagtatgctcgtctaatgggc
ttccatcatatgcaacctagctcacagcccataaatgtcttcagattttgtccctcaaca
gtcttgcaaagtcaaacgccagcagcaactggccctgctagtggacctacttttggggga
tctatagccaatgatattgtaaatggaactttgggttga
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