Cucurbita moschata (crookneck pumpkin): 111444298
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Entry
111444298 CDS
T05248
Name
(RefSeq) transcription factor PIF3-like isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04075
Plant hormone signal transduction
cmos04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111444298
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
111444298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmos03000
]
111444298
Transcription factors [BR:
cmos03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
111444298
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
111444298
NCBI-ProteinID:
XP_022938111
UniProt:
A0A6J1FC87
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All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MPLSELYRVARGKNNMVSADSSLNPENDVYELVWENGQILLQGQSSKARKNSCVPFHSPK
GTDSVIRDVLGHDDDDDDDDMVPWLNYPLDEHSSEFLLELSGVTVNDPLSRNSTSKQVDG
DAQLNHLHGARLEGGNVSKVSSMDVSSARARSCTNQLHSSASQQSQISLPHLSSSSTARH
NSSNIMNFSHFLRPAVLKSNDQNRDVTKGVGFSSMRCVGSVDKNCSAGNTQPYESSFFKT
RGSIRNESKSCCENAVVPSIDNSNPSGVKAPETLEVVEQPEVACLGDSAKNDDHPEPCLE
AGASKGLSDSEKVVESVIAASVCSRTSMKRALDDTTVVRKRKCHDTEDSEWHSDDVEEES
NDVNRATPVRGNGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEA
IEYLKTLQLQVQIMSMGAGLFMPPMMFPGGLPPMNAPHIYSPMGVGIGMGYGIAMPDMNG
GSPGYPMAQMPHVQGTHFPSPSIPAQTVMHGMPGSNFHVLGLPGQGLPLSMPHGPIAPFR
GGPFMTNSSVAVAPVESFGLAAACSSKDSSPKMNAPTVRNGGNDPLITSPRQGNEQASSV
NGSGTNPTNNNETTL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgcctctatctgagctttatcgtgtggccagaggaaagaacaacatggtttctgcagat
tcatctctaaaccctgaaaatgatgtttatgaacttgtgtgggagaatggccaaattttg
ctgcaaggacagtccagtaaagccaggaagaactcatgtgtaccatttcatagtcccaag
ggtactgattctgtaatcagagatgtattgggacatgatgatgatgatgatgatgatgat
atggtgccttggcttaattatcctcttgatgaacattcttctgaattcttacttgaatta
tctggggtcactgttaatgatcccctctcgcgcaatagtaccagtaagcaggtcgatggc
gatgcgcagctcaatcatttgcacggtgctcgtcttgaaggtggcaatgtttccaaggtt
tcttcgatggatgtttcgagcgctcgagctagaagttgcacgaatcaattacattcatca
gcatctcagcaaagccagatatcacttccacatctcagttcttcaagcacagcaaggcat
aattcatcgaatatcatgaatttttcccattttctgcgacctgctgttcttaaatccaat
gatcagaatcgtgacgtgactaaaggtgtcggtttttcgagtatgcgctgtgtaggcagc
gtggataagaattgttcagcaggtaatactcaaccttatgaatcatcgttttttaaaact
cgtggtagtataagaaatgaatcgaaatcatgctgtgaaaatgcagtagtgccttccata
gataatagcaatccatcaggtgtcaaggctcctgagacactggaggttgtcgaacagcca
gaggttgcttgtttgggagattcagccaaaaacgatgaccatcctgaaccgtgtcttgaa
gcaggtgcaagtaaaggattgtcagatagtgagaaggttgttgaatctgtaatagctgct
tctgtttgttcacgcactagcatgaaacgagctttggatgatacgaccgtcgttaggaag
agaaaatgtcacgacaccgaggattccgaatggcacagtgatgatgtagaagaagaaagc
aatgacgtgaacagagcgactcctgttcgaggaaacggttcgaaacgaagcagggcagca
gaagtgcataatttatcagaaagacgacgtagagataggatcaacgagaagatgcgtgcg
ttgcaagaactcataccgaattgtaataaggttgacaaagcttccatgctcgatgaagcg
atcgagtacttgaaaacgcttcaacttcaggttcagattatgtcgatgggagctggtttg
ttcatgcctcccatgatgttccctggaggactgccacccatgaatgcacctcatatttat
tcacccatgggcgtaggaataggaatgggatatgggatagctatgcctgacatgaatggt
ggttctcctggctatcccatggctcaaatgccacacgtgcaaggaacgcatttcccgagc
ccatcaataccagctcaaactgtaatgcatggaatgccaggttctaactttcatgtcctt
ggacttcctggtcaaggactccccttgtcgatgccacatggcccgattgctccgtttcgt
ggaggaccttttatgactaattccagtgtggcagtagctcctgtagagagtttcggttta
gctgcagcttgtagctcgaaagattcgtccccgaagatgaatgcaccgaccgtgcgaaat
ggtggcaacgaccctttaataacatctcctagacagggtaacgaacaagcttccagtgtc
aatggcagtggtacgaacccgaccaacaataacgaaacgacgttataa
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