Cucurbita moschata (crookneck pumpkin): 111450526
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Entry
111450526 CDS
T05248
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor PIF3-like
KO
K12126
phytochrome-interacting factor 3
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04075
Plant hormone signal transduction
cmos04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111450526
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
111450526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmos03000
]
111450526
Transcription factors [BR:
cmos03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
111450526
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
111450526
NCBI-ProteinID:
XP_022946480
UniProt:
A0A6J1G3Z2
LinkDB
All DBs
Position
Unknown
AA seq
697 aa
AA seq
DB search
MPLSELCRVAREKLDSAQDRNDMVASDLSLSPENDVFELVWENGQILQQGQSSRTRKNSN
MNTSQPLCLPGHFNNAKMGKFGAIDSVVRDVIATGSSPEVELARDDDDDDNDIVPWLSYP
LDGHLQHDYSSDFLPELSGVTINDHPARHSVASSIGKTSGVHQVNRYTRLNSLHGTNLED
GNISKLSTLDVSTTGPRSSTNELRSLASQQSQALFPHLRVKCTGSTENVPGKILHDSLIG
QTPHVPLIASSSSSTARQKLDPTPSSNSPNVINFSHFLRPAALLKSNPQNHGVVGTVGSA
ANSQRDQSSCIRNESKACCKNAIVPSIDDNKPSDAKAPEQLQAVKHPKLACLGDSANNED
RTDRCLEVGAPKVLPDSEKAVESIFAASVCSRNSVEGASDDPKLNRKRKCHETEDSEWHS
DDVEEECNDVKRVTPTRGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDK
ASMLDEAIEYLKTLQLQVQIMSMGAGLFMPPMMSPGGMPFMNAPHMYSPMGVGMGMGFGI
GMPDVNVGPPGYPMVQVPHVQGTHFPGPSIPAQTVMHGMPGSNFQVLGLPGQGLPIPMPR
GPIAPFTGGPFMTNPGVAVAPVENFGSAAACSLKDASPKSDSPMVPNGGTDPLTTPTPRQ
ANEQASCANGSRVNPTTKNDLIKLPIITEETTFIRLH
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcctctatctgagctttgtcgtgtggctagagagaagcttgattcagctcaagacagg
aacgacatggttgcttcagatttatctctgagtcccgagaacgacgttttcgagctggtt
tgggagaatggccaaattttgcagcaaggtcagtccagtaggactaggaagaactcaaat
atgaacacttcacagcctctgtgtttaccaggacatttcaataatgcaaagatgggaaag
tttggggctattgattcggtagtaagagatgttatagcgacggggtcatcgcctgaggtc
gaattggctcgtgatgatgatgatgatgataacgatatcgtgccttggctgagttatcct
cttgatggacatctgcaacacgattattcttcggatttcttacctgaattatcaggggtc
accattaacgaccaccctgcacgccatagcgttgcgtcttctataggcaaaactagtggt
gttcatcaggtaaacagatatacgcgcctaaattctttgcacggtactaatcttgaagat
ggcaatatttcgaagctttctacattagatgtttcaactactggacctagaagtagcacg
aacgaattacgttcgttagcatcccagcaaagccaggcattatttccacatcttagagta
aaatgtacaggcagcactgaaaacgtgccgggcaagattctccatgattctcttataggc
caaactcctcatgttccattgattgcaagcagttcttcaagcacagctaggcaaaagcta
gatccaactccttcaagtaattcacccaatgttataaatttttcccattttctgagaccg
gctgctcttctcaaatccaatcctcagaaccatggtgtcgttggaaccgtgggttcagca
gctaatagtcaacgcgatcaatcgtcatgtataagaaatgaatcaaaggcgtgctgtaaa
aatgcgatagtgccttccatagatgataacaaaccatcagatgccaaggctcctgagcaa
ttgcaggctgtcaaacatcccaagcttgcttgtttgggagattcagctaacaatgaagac
cgaaccgatcgttgtcttgaagtaggtgcaccaaaagtattgccagatagcgagaaggct
gttgaatctatatttgctgcttctgtttgttcacgcaatagcgtggaaggagcttccgat
gatccaaagcttaataggaagagaaaatgccacgagactgaggattctgaatggcatagt
gatgatgtagaagaagaatgcaatgatgtgaagcgagtgactcccactcgaggaactggt
tcgaaaagaagcagggcagcagaagtgcataatttatctgaaagacgacgtagagacagg
atcaatgagaagatgcgtgcactgcaagaactcataccaaattgtaataaggtcgacaaa
gcttccatgctcgatgaagccattgagtacttgaaaacgcttcaacttcaggttcagatt
atgtcgatgggagctggtttgttcatgcctcccatgatgtcccctggaggaatgccattc
atgaatgcacctcatatgtattcacccatgggtgtaggaatgggaatgggattcgggatc
ggtatgcctgacgtgaatgttggccctcctggttatcccatggttcaagtgccacacgtg
caaggaacgcattttcctggcccgtccattccagctcaaactgtaatgcatggaatgcca
ggttctaactttcaggtgcttggacttcctggtcaaggacttcccatccccatgccacgt
ggaccgattgcaccatttaccggagggccttttatgaccaatcccggtgtggcagtagct
cctgtcgagaattttggttcagctgcagcttgtagcttgaaagatgcgtctccgaagagt
gattcacctatggtgccaaatggtggcactgatcctttaacaactccaactcctagacag
gctaatgaacaagcttcctgtgctaatggcagccgtgtgaaccccaccaccaaaaatgac
ctaattaagttgcctattattactgaagaaaccacattcattaggcttcattag
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