Cucurbita moschata (crookneck pumpkin): 111455591
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Entry
111455591 CDS
T05248
Name
(RefSeq) DNA polymerase kappa isoform X1
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
111455591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmos03400
]
111455591
Enzymes [BR:
cmos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
111455591
DNA repair and recombination proteins [BR:
cmos03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
111455591
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IMS
IMS_C
zf_UBZ
IMS_HHH
Motif
Other DBs
NCBI-GeneID:
111455591
NCBI-ProteinID:
XP_022953078
UniProt:
A0A6J1GMD5
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MERKQIDGDRPWQSYNTVYTNAKAGMEGVDKEKVQRIVYEMSKGSKYFENEERKEAIIRE
KIEKMRARCMQLTATDLSQYQKVADKRILELEGTRDLSRIWLHVDMDAFYAAVETLSNPL
LEGKPMAVGSMSMISTANYEARKYGVRAAMPGFIARRLCPELIFVPTDFKKYNYYSDLAR
KVFRRYDPNFLAASLDEAYLDITEVCKDRGLTSEQIAMDLRTSIYEETGLTCSAGVAANR
LLAKVCSDINKPNGQFILPNDRRAIVTFVSSLPIRKIGGIGKVTEHILKDGLGINTCEEM
LQKGGHLCALFSISSADFFLSVGLGLGSTDTPQVRLRKSISNERTFAATAEEKLIFQKLA
DLAEMLSMDMEKEGLSGRTLTLKLKTASFEVRTRAVTLQQYICSSSDILQHASKLLKAEL
PISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNMGDCCTSSPDPNVHSFM
DESEIDVFINGTETHHQDSSHPRVGNNLSNMDDRNCTSSNDVEKSEKFKNLSSNVSTDQV
DNLNGFVPRVSGTACASSPRNLEGNQNNNVEARTNVEARSPDNNGQNLWIDDYKCAICGA
EVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQKRQKSTPK
KEVKHIPIDLFFVKNNQKF
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaaagcagattgacggcgatcgtccgtggcagtcttacaacactgtctacacc
aatgcaaaagccggtatggaaggtgttgacaaggagaaagtacaaagaattgtctatgaa
atgagtaaagggtcgaaatattttgaaaatgaggagcggaaagaggccatcatcagagaa
aagattgagaagatgcgagctagatgtatgcagcttactgcaacggatctttctcagtat
caaaaggttgcagataaaagaattttggagctggaaggtacacgtgacctgtcaaggata
tggttgcatgtagatatggatgctttctatgccgctgttgaaactttaagcaatccttta
ttagagggcaagccaatggctgttggtagcatgtcgatgatttctactgctaactatgag
gctcgaaaatatggagttcgtgctgctatgcctggttttattgcacgtagattatgtcca
gagttaatttttgttcccacagatttcaagaagtataattattacagtgatttagctaga
aaagtattccgtaggtatgaccccaacttcttggctgctagtctggatgaagcatacctc
gatataactgaagtctgcaaagatagaggccttactagtgaacaaattgctatggatctc
agaaccagtatttatgaagaaactggtcttacgtgtagtgcaggggttgctgccaaccgg
ctacttgccaaggtctgctctgatattaacaaaccaaatggacagttcattttgccaaat
gaccgaagagctattgtaacattcgtatcatcactacccataagaaagattggtggcatc
ggaaaggtcactgaacatatcttaaaggacggtttggggattaatacatgtgaggagatg
ctacagaagggtggtcacctctgtgcgttgttttctatatcctcagcagattttttcttg
tcggttgggcttggcctcgggagcaccgatactccacaggtgagattgcgtaagagcatc
agtaacgaaagaacgtttgcagccactgctgaagaaaaattaattttccagaaacttgct
gaccttgcagagatgctgtctatggacatggaaaaagaaggtctgagcgggcgaacactg
acgcttaaactaaaaactgcatcctttgaggttagaaccagagctgtaactttgcaacaa
tacatttgttctagcagtgacatcttgcaacatgcatcaaagctgctaaaggctgaactg
cccatttctttgagactaatcgggttgcggatatctcacttcaatgaagatggagccatt
gctgggtctgatccagctcaaacacctattactcgatttattacatcaggagatgctact
agaaagaatatgggtgattgttgcacctcaagtcctgatcctaatgttcatagcttcatg
gatgaatctgaaattgatgtatttatcaatggcactgaaacacaccatcaagatagtagt
catccaagagttggcaataatctctcgaatatggatgaccgaaactgtacgtccagcaat
gacgttgagaagtcggagaaatttaagaatctttcgagcaacgtcagtactgatcaggtg
gacaatttgaatggctttgtccctcgagtatcgggcacagcatgtgcttcttcccctaga
aacctcgaaggcaatcagaataataatgtcgaagccagaactaacgtcgaggcaagatca
ccagataataatggacagaatttgtggatcgatgactacaaatgtgcaatctgtggtgcc
gaagtaccagagagtttcattgatgaaagacaagagcacatggattttcacattgcggaa
aaactccaggaagaggaatctggcattcgttcaagaacccttacgccaatccgaaggact
cctgacaagaaccaactggcaagtcaaagaaagcagaaaaggcaaaagtcaactccaaag
aaagaggtcaaacacattccaattgacttattctttgtgaagaataatcagaagttttag
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