Cucurbita moschata (crookneck pumpkin): 111456494
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Entry
111456494 CDS
T05248
Name
(RefSeq) ABC transporter I family member 19-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111456494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111456494
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111456494
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
nSTAND3
ORC-CDC6-like
AAA_29
SMC_N
AAA
AAA_28
NACHT
AAA_5
AAA_15
AAA_23
AAA_30
AAA_18
AAA_22
AAA_33
SRP54
Zeta_toxin
AAA_16
PduV-EutP
AAA_25
AAA_24
DUF7428
AAA_14
Arf
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
111456494
NCBI-ProteinID:
XP_022954146
UniProt:
A0A6J1GQ25
LinkDB
All DBs
Position
Unknown
AA seq
307 aa
AA seq
DB search
MADKEISFHGKEGCEDVDEKSSTGIKVQAMQFAYEIDSPLFVEFNLEIGSGSRCLLVGAN
GSGKTTLLKILAGKHMVGGRDVVRVLNSSAFHDTHLVCSGDLAYLGGSWSKTVSSAGEVA
LQGDFSAEHMIFGVEGTDPERRDRLIDLLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKV
LLLDEVTVDLDVVARMDLLDFLKEECDQRGATIVYATHIFDGLETWATHLAYIQDGELRK
SEKLCEVDELKHCANLLSVVETWLRAETKLKKKKKKNPILPPSNTQKNVSPFGSSPFSSS
RHMAYYR
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaaggaaatttcgttccacgggaaagagggttgtgaagatgtagatgagaag
agttctaccggcatcaaggtacaagcgatgcaatttgcttacgaaattgattcgcctctt
ttcgtggagtttaatctcgagattggctctggatctcgttgtcttctcgttggcgctaat
ggatctgggaagactactttgctgaaaattttggctggaaaacatatggttggaggaaga
gatgtcgttcgggttctaaatagttcagcttttcatgacactcacctcgtatgtagtggt
gatttagcctacttgggaggatcttggagtaagaccgttagctctgcaggcgaggttgca
ttacagggagacttttctgctgaacatatgatatttggagtcgaaggaacggatcctgaa
aggagagataggctgatcgacctccttgatatagatctccagtggcgaatgcataaggta
tctgatggacaacgtcgtcgggtgcaaatctgcatgggcctcttacatcctttcaaggtt
ctcttgctagatgaggtcacagttgaccttgatgtcgttgcaaggatggaccttctggac
ttcttaaaggaagagtgtgatcagagaggagctactatagtatatgcaactcacatattt
gatggactggagacatgggcaactcatctggcatatattcaagatggtgagctaagaaag
tcagagaagctgtgtgaagttgatgagttgaagcattgtgccaatttgctttctgtggtt
gagacttggctgcgtgctgaaaccaaactcaagaagaagaagaagaagaacccaattctc
cctccatccaacacgcagaagaacgtttctccttttggttcatctcctttctcgtcttcc
agacatatggcttattatcgctag
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