Cucurbita moschata (crookneck pumpkin): 111457524
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Entry
111457524 CDS
T05248
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic-like
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
111457524
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cmos01007
]
111457524
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmos03016
]
111457524
Enzymes [BR:
cmos01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
111457524
Amino acid related enzymes [BR:
cmos01007
]
Aminoacyl-tRNA synthetase
Class I (U)
111457524
Transfer RNA biogenesis [BR:
cmos03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
111457524
Prokaryotic type
Other AARSs
111457524
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
111457524
NCBI-ProteinID:
XP_022955542
UniProt:
A0A6J1GTY1
LinkDB
All DBs
Position
Unknown
AA seq
1184 aa
AA seq
DB search
MDEVCEGKDFSFPKHEEVVLEYWSDIRAFETQLERTKDLPEYIFYDGPPFATGLPHYGHI
LAGTIKDIVTRYQVMTGHHVTRRFGWDCHGLPVENEIDQKLGIKRRDDVLKMGIDKYNEE
CRSIVTRYVGEWEKIITRTGRWIDFKNDYKTMDLKFMESVWWVFSQLFEKGLVYKGFKVM
PYSTGCKTPLSNFEAGQSYKDVPDPEIMVTFPVLGDPQNAAFVAWTTTPWTLPSNLALCV
NANFVYVKVRNKASGKVYVVAKSRLSALPVEKQKVNAPNGSTEVVNKSNPKKKGSSNSKT
ENSVEDSYEVLEEVLGASLVGKKYEPLFDYFKEFSDVAFRVVADNYVTDDSGTGIVHCAP
AFGEDDYRVCIENQVINKGENLIVAVDDDGCFTTKITQFSGRYVKDADKDIIEAVKAQGR
LVKSGSFTHSYPFCWRSDTPLIYRAVPSWFVRVEKLKEKLLENNEKTYWVPDFVKEKRFH
NWLENARDWAVSRSRFWGTPLPVWVSEDGEEILVMDSIEKLEQLSGVKVFDLHRHKIDHI
TIPSRRGPEYGVLRRVDDVFDCWFESGSMPYAYIHYPFENVELFEKNFPGHFVAEGLDQT
RGWFYTLMVLSTALFGKPAFRNLICNGLVLAEDGKKMSKRLKNYPSPMEIINDYGADALR
LYLINSPVVRAETLRFKKEGVFGVVRDVFLPWYNAYRFLVQNAKRLEIEGFAPFSPVDQA
TLQKSFNVLDQWINSATQSLVYFVRKEMDGYRLYTVVPYLLKFLDNLTNIYVRFNRKRLK
GRTGEEDCRIALSTLYHVLLTSCMVMAPFTPFFTEALYQNLRKVSDGSEESIHYCSYPQE
GGKRGERIEESVTRMMTIIDLARNIRERHNKPLKTPLREMIVVHPDKDFLDDIAGKLREY
VLEELNIRSLIPCNDTLKYASLRAEPDFSVLGKRLGKAMGVVAKEVKAMSQEDILAFEKV
GEVTIATHCLRLSDIKVVRDFKRPDGMTDKEMDAAGDGDVLVILDLRPDESLFEAGVARE
IVNRIQKLRKKAALEPTDSVEVYFRSQDEDASVAQRVLNAQELYISEAIGSPLLPSALLP
SHAVTLAEESFQNVAGISFSIILARPVPVFNSDAVTALYKGNEKFARALEVYLLSRDLSN
LKTEFSGNGKMRVDYIDGQPGVEVALGEHVFLTAGDKFLKAKSS
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggtttgcgagggtaaggacttttcgttccctaagcacgaggaggtggtgctt
gagtattggtctgatatcagggcatttgagacccagcttgagcgcacaaaggaccttcct
gagtatattttttatgatggccctccgttcgccactggtcttccacattatggtcacatc
ttggcgggaaccatcaaggacattgtcacccggtatcaggttatgaccggtcatcacgtg
actcgtcgctttggatgggactgccatggattgcctgttgagaacgagattgatcagaag
ctagggatcaagaggagagacgatgtgttgaagatggggattgacaagtacaatgaagaa
tgcagaagtatagtcacgagatatgtgggggaatgggaaaaaatcatcacgcgtactggt
cgatggattgactttaaaaacgactataagactatggacttgaaattcatggagagtgtt
tggtgggtcttttctcagctcttcgagaaaggtcttgtctataaaggcttcaaggtcatg
ccatatagtactggttgcaagacgccactttcaaacttcgaagctggtcaaagctataag
gatgtccctgatcctgaaatcatggtaacttttccagtactcggggatccgcaaaatgca
gcttttgtggcttggacaacaactccatggacccttccgagtaatcttgccctttgtgtt
aatgcaaattttgtctatgtgaaggttcgcaacaaggcatctggaaaagtttatgtggtt
gctaaatcccgattgtcagctctacctgttgagaaacaaaaagtgaatgcaccaaatggt
tctaccgaagttgttaacaagtcaaatcctaagaaaaaaggttcctcaaattcaaaaaca
gagaactcagtggaggactcatatgaggtattggaggaagtattgggagcttctcttgtg
ggtaaaaagtacgagccactgtttgattactttaaagagttctctgatgtggcatttaga
gttgttgcagataattatgtaactgatgatagtggtacgggtattgtccattgtgctcct
gcattcggtgaagacgactatcgtgtttgcattgagaaccaagtgatcaataagggcgag
aatctgattgttgcagtcgatgacgatggttgctttacaacaaagattactcaattttct
gggcgttacgtcaaggatgcagacaaagatataattgaagccgtgaaggcacaagggagg
cttgttaaatcgggaagctttacccattcttatcctttctgctggagatctgatactccc
ctaatctacagggctgtcccaagctggtttgtccgagttgagaaattgaaggagaaatta
ctggaaaacaacgagaagacttactgggtgcctgattttgtgaaggagaaaaggttccat
aattggctagagaatgcgagagattgggctgtcagccgtagtagattttggggaactcct
ctccctgtctgggttagcgaggatggagaggaaatactggtcatggattcaattgagaaa
cttgaacagctttctggtgtcaaggtgtttgatttgcatcggcacaagattgatcacatt
actattccatctagaagaggtcctgaatatggtgtgcttcggagggtagatgacgtgttt
gattgctggttcgagagtgggtctatgccatatgcatatattcattatccatttgaaaac
gttgagctttttgagaaaaactttcctggtcactttgtggcagaagggcttgatcaaact
cgtggatggttctatactctcatggttctatctactgctttatttgggaagcctgcattt
aggaaccttatttgtaatggccttgtccttgctgaggatggaaaaaagatgagcaaaagg
ttgaaaaattatccttcaccaatggaaatcataaatgactatggagctgatgctctgcga
ttataccttataaattctccagttgtacgtgcagagactttacgcttcaagaaggagggc
gtttttggtgttgtcagggatgttttcctgccatggtataatgcctatagatttcttgtt
cagaatgctaagaggctcgaaattgagggatttgcaccattttctcccgtagatcaagct
acccttcaaaagtcgttcaatgtgcttgaccaatggataaactctgccacccagagttta
gtatattttgtcagaaaagaaatggatgggtaccgactctacacggtagttccatatctt
ctaaagtttcttgacaaccttacaaatatttatgtgaggttcaaccgcaagagactaaag
ggccgtactggggaagaagactgcaggatagcactctctactctgtaccatgtcctttta
acgtcttgtatggtcatggctccatttacaccatttttcaccgaagctttatatcaaaac
ttacggaaggtttctgatgggtcagaggaaagcattcattactgttcttatcctcaggaa
ggaggaaagagaggtgaaagaattgaagaaagtgttacaaggatgatgacaattattgat
cttgctcgcaacattcgggagcgtcataacaagcctcttaaaacacctttgagagaaatg
atagtggttcatcctgacaaagattttcttgatgacatagccggaaagctaagagagtac
gttctcgaggaattaaatataagatctcttatcccatgcaatgatacgttgaagtatgca
tctcttcgtgctgagccagattttagtgtgttgggaaagcgtcttggaaaagctatggga
gtcgtggcaaaggaagtcaaagcaatgtcacaggaagatatcttggctttcgagaaagtg
ggagaagttactattgctactcattgtttaaggttatctgacataaaggttgttcgtgat
ttcaaacgacctgatggtatgacagacaaggaaatggatgctgctggggatggtgatgta
ctagtgattttggatttacgtccagatgaatctctattcgaggctggtgttgctcgtgag
attgttaatagaatccagaagttgagaaagaaagctgcccttgaacctaccgactccgta
gaggtgtattttcgatcacaagatgaggatgcatcagttgcgcagagagttttaaatgca
caggaactatacataagcgaggcaatcggttcacccttgcttccgtctgctttgttgcct
tcacatgcagtcacgcttgctgaagagagtttccaaaatgtagccgggatttcattttcg
attatcttggccagaccggtacccgtattcaattcggacgctgtgactgctctatataaa
ggtaacgagaaattcgcccgagcactcgaggtctacctgctctcgagagacctctccaac
ttgaagaccgagttctctggaaatggcaagatgagggttgattacattgatgggcagccg
ggtgtggaagtggcactgggagagcatgttttcttgacggccggcgacaagtttctgaag
gccaagtcttcataa
DBGET
integrated database retrieval system
