Cordyceps militaris: CCM_07660
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Entry
CCM_07660 CDS
T03108
Name
(RefSeq) U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
cmt
Cordyceps militaris
Pathway
cmt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CCM_07660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmt03041
]
CCM_07660
Spliceosome [BR:
cmt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
CCM_07660
Complex C
U5 SnRNP specific factors
CCM_07660
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
DUF6716
Motif
Other DBs
NCBI-GeneID:
18169670
NCBI-ProteinID:
XP_006672863
UniProt:
G3JQW4
LinkDB
All DBs
Position
Unknown
AA seq
981 aa
AA seq
DB search
MDDLYDEFGNFIGEEVESEAGSDAGLDAADYVYDDAAGDIQDEDELMEVDDGPSNAVILH
EDKQYYPTAEQVYGQDVETRVEEEDAQPLTQPIIAPIETKKFTIEEEDLPPVYYSREFMA
DLMNFPDQIRNVALAGHLHHGKTAFTDMLVLETHDILQKLDKRVGRKRDEALRYTDIHIL
ERERGVSLKSSPMSFVLPNSKGKSHLVNVIDTPGHVNFVDEVAAAFRLVDGVCLVVDVVE
GVQVNTEQIIKHAVLQDLPLTLIINKMDRLIVELRLPPKDAYFKLKHVVEEVNTIITNTA
PATSAAKRLSPEKGNVLFACTDMGWCFTLQSFAKMYATSYGDVNAEDLAKRLWGDVYFNP
KKRTFSRKPLEDRTARSFVHFVLEPIYKIFTHSISDSPEDLRPVLESLGIQLKPAQYKAD
AKVILKLVCEQFFGPSTGFVDMLVQHIPSPVESAQRLLERHYTGPLDSKVAKSMLDCNQD
GPLVIHITKLFNKPDAKSFYSFGRVLSGTARPGTQVRVLGEGYSLDDEEDMAMTTINQVF
IGETRYNIPTDGVPAGNLVLLDGVDNSIVKTATIVPPALEDGEDAYIFKPVSHFTESVLK
VAVEPINPSELPKMLDGLRKVQKSYPLLDTKVEESGEHIIIGTGELYMDCVLHDLRRLYA
DMDIKVSDPVTRFCETVVETSATKCYAITPNKKNKITMVAEQLEKGISTDIETGAVKIRD
AIRKTAKFFEEKHGWDKLAARSIWAFGPEDAGPNILQDDTLPTEVDKKLLSTVRESIRQG
FSWATREGPLCEEPIRNTKFKLTDITLAGEAIFRGGGQIIPTSRRACYSSFLMASPRLME
PVYAVSVTGPEDSYMEVYNVLARRRGHVLSDGPVAGTPLYRVNGLLPVIDSFGFETDLRI
RTQGSAMVSLVFDSWSVVPGDPLDREQVVHPLQPASVQATARDFVLKTRRRKGLSEDVSV
KTFLEPEFYQSLMESGMLGEL
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggatgatctttacgatgagttcggtaacttcataggcgaggaagttgagtcggaggcc
ggctctgacgcgggcctggacgccgccgattatgtatatgatgatgctgccggcgacatt
caggatgaggacgagctcatggaggtggatgatggcccctcaaacgcagtcattctccac
gaagacaagcagtactaccccaccgccgaacaggtctatggccaagatgtcgaaacccgc
gtcgaggaggaggatgcgcagcctcttacacagcccatcatcgcaccgattgagacgaaa
aagttcaccattgaagaggaggacctcccgcccgtgtactacagccgcgagttcatggcg
gacctgatgaactttcccgaccaaatacgaaacgtcgcactcgctggccacctgcaccac
gggaagacggcctttacagatatgcttgttctggagacgcacgacatcctccagaagctg
gacaagcgagtcggtcgaaagcgcgacgaggccctccgctacacagacattcacatcctc
gagcgcgaacgcggcgtctcactcaagtcatcaccgatgagctttgtgctgccgaactcc
aagggcaagtcgcatttggtcaatgtgattgacacgcctggccatgtcaactttgtcgac
gaggtcgctgccgctttccgactggtggacggtgtttgtttggtagtcgacgtggtcgaa
ggtgtccaggtaaacacggagcaaattatcaagcatgctgtgctacaggatttgccgctg
acattgatcatcaacaaaatggatcgtctgattgtggagctgagactgccgcccaaggac
gcatactttaagctaaaacacgttgttgaagaagtcaacaccataatcacaaacaccgct
cccgctacctctgcagcgaagcgcctcagtcccgaaaagggaaatgtgctctttgcctgc
actgatatggggtggtgttttacactacagtcatttgccaaaatgtacgcgaccagctac
ggcgacgtcaacgccgaggacctggcgaagcgtctatggggagacgtctacttcaacccc
aagaaacgaacattttcacgcaaaccactcgaggatagaaccgcgagatcatttgttcac
tttgtgctggagcccatctacaaaatctttacacattctatcagcgacagcccagaggac
ttacgcccagtcctggagtctctaggaattcagctgaaacccgcgcaatacaaggcagat
gctaaggtcattctgaagcttgtgtgcgagcagttttttgggccctctaccggcttcgtc
gatatgcttgtgcaacacataccttcgccagtcgagtcggcgcaacgattgctggagcgt
cactacacggggcccctggatagcaaggttgccaagtctatgctggactgtaaccaagat
gggcctcttgttattcacattacgaagcttttcaacaaacctgacgccaagagcttctac
tcctttggacgagtcttgagcggaactgcgcgccctggcacgcaggttcgagtgcttgga
gaaggatactccctggacgacgaggaagatatggcaatgacaacaatcaaccaggtattt
attggcgagacgagatataatattcccaccgatggtgtgccagctggcaacctcgtgcta
ctcgacggagtcgacaactcaatagtcaagacggccacgattgttccacccgcgctagag
gacggcgaggatgcttacatcttcaaacccgtcagccactttacagaatcagttctcaag
gttgctgttgagcccatcaacccttcggagctacccaagatgcttgatggtttacgaaag
gttcaaaagtcatatcctcttcttgacactaaggttgaggagtctggcgagcacattatc
attggaactggcgaactatacatggactgtgtgctgcacgatttgcgccgtctttacgca
gacatggatatcaaggtgtcggatcccgtaacgagattctgcgaaactgtcgtggaaact
tccgccaccaagtgctatgccatcacaccgaacaagaagaacaagatcaccatggttgct
gagcaactagaaaagggcatttcgaccgacattgagacgggggccgtcaagatccgggac
gccatcaggaagacggccaagttctttgaggagaagcacgggtgggacaagctggctgcg
cgcagcatctgggcgtttggccctgaagatgccggcccgaacatcctgcaagacgacacg
ctaccgacagaggtggacaagaagctgctcagcacagtgcgcgagtcgatccgccagggc
tttagctgggcgacacgcgagggtcccctctgcgaggagccgatccgcaacaccaagttc
aagctgactgacataacgctcgccggcgaggccattttccgcggcggcgggcagatcatc
ccgacgtcgcgccgcgcgtgctactcgtcgtttctgatggcgtcgccgcggctgatggag
cccgtgtacgccgtgtcggtgacggggcccgaggactcgtacatggaggtgtacaatgtg
ctcgcgcgccgccgcgggcacgtcctctccgacgggcccgtcgccggcaccccgctctac
cgcgtcaacggcctgctgcccgtcatcgactcatttggcttcgagacggacctgcgcata
cgcacccagggcagcgccatggtctccctcgtctttgacagctggagcgtcgtccccggc
gacccgctcgaccgcgagcaggtcgtccacccgctgcagcccgcgagcgtgcaggccacc
gcccgcgactttgtcctcaagacgcggcgccgcaagggcctcagcgaggacgtcagcgtc
aagacatttctcgagcctgaattctaccagagcctcatggagagcggcatgctgggcgag
ctgtaa
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