Citricoccus muralis: P8192_05000
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Entry
P8192_05000 CDS
T08998
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cmua
Citricoccus muralis
Pathway
cmua03030
DNA replication
cmua03410
Base excision repair
cmua03420
Nucleotide excision repair
cmua03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P8192_05000 (ligA)
03410 Base excision repair
P8192_05000 (ligA)
03420 Nucleotide excision repair
P8192_05000 (ligA)
03430 Mismatch repair
P8192_05000 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmua03032
]
P8192_05000 (ligA)
03400 DNA repair and recombination proteins [BR:
cmua03400
]
P8192_05000 (ligA)
Enzymes [BR:
cmua01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
P8192_05000 (ligA)
DNA replication proteins [BR:
cmua03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
P8192_05000 (ligA)
DNA repair and recombination proteins [BR:
cmua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
P8192_05000 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P8192_05000 (ligA)
MMR (mismatch excision repair)
DNA ligase
P8192_05000 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
P8192_05000 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH_5
BRCT_2
Bac_small_YrzI
Motif
Other DBs
NCBI-ProteinID:
WFP17466
UniProt:
A0ABY8H8I6
LinkDB
All DBs
Position
1084019..1086349
Genome browser
AA seq
776 aa
AA seq
DB search
MSTENTNESISTPREQDIPDQQLRENYEQLMEEVRHHRTAYYQNDAPEISDAEFDNLFRR
LEDLEALHPEIVSNDSPTQEVGGDVSSAFAPVEHLARMYSLEDVFSLDELRTWFHRAAGS
LQQIRPGVKPSWLAEVKIDGLAINLLYRDGELVRAATRGDGVTGEDVTHNVLTIEDIPTT
LTGDDIPAEVEVRGEIFMRTQDFRDFNAQRAEAGLPPFANPRNAAAGSLRQKDPEQTAQR
PLTMFVHGIGAQQGLSVGSQHEAYEQLAAWGLPTSPYSVLVPGDTDIEPESSAPLAKLLD
FIAERGEQRHDLIHEIDGIVIKVDDFGLQAQLGHTSRTPRWAVAYKYPPEEVHTRLLDIK
VNVGRTGRVTPYAVMEPVLVAGSTVSMATLHNQDVVRAKNVKIGDTVVLRKAGDVIPEIV
GPVLPLREQHERDGELRDFVMPTHCPSCGEPLAPAKEGDVDLRCLNAHRCPAQLTGRIEH
AGSRGAFDIEALGEEAATWLTNGPGEDPAENHGHVQPAGEGVITADAQLFDLAADGDEEL
KQRLAEVRVWREKRSKGQGTGKWELVPYFYTKATAKTPSKPTANTVKLFDELEKAKSQPL
WRVLVALSIRHVGPTAARALAGAFGSLPQLQATALDEENGRQRLSDVDGVGPTIADAVSE
WFRDEVNRTTVERWAAAGVRMEDEMDESVAKTLEGLTVVVTGSLQNYTRDSAKEAIISRG
GKASGSVSKKTDFVVAGENAGSKLDKAESLGLTVLDEDGFTALLKNGPSGVDEGSV
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccgagaacacgaacgagtcgatctccacaccccgcgagcaggacattcccgac
cagcagttgcgcgaaaattacgagcagctgatggaagaggtccgccaccatcgcaccgcg
tactaccagaatgacgccccggagatttccgacgccgaattcgacaacctcttccgccgt
cttgaagacctcgaggcgctgcacccggagatcgtctccaacgattcgcccacccaagaa
gtcggcggcgatgtgtcgtccgcgttcgcccccgtggagcacttggctcggatgtactcg
ctggaggacgtcttctccctggacgagctgcgcacctggttccatcgtgccgctggttcc
ctgcagcagatccgccctggcgtgaagcccagttggttggccgaagtcaaaatcgacggg
ctcgcgatcaatctcctctaccgcgacggtgaactcgtgcgcgccgccacccgtggagac
ggcgtcaccggtgaagacgtcacccacaacgtgctcaccatcgaagacatccccaccacc
ctcaccggggatgacatccccgccgaggtggaagtgcgcggcgagattttcatgcgcacc
caggacttccgcgacttcaacgcccagcgcgccgaagccgggttgccgcccttcgccaat
ccgcgcaatgctgcggctggctccctgcgacagaaggacccggagcaaaccgctcagcga
ccgctcaccatgttcgtccacggcattggcgctcagcaggggctgagtgtcggctctcaa
cacgaggcgtacgaacagctggccgcctgggggctgcccaccagcccctacagcgtgttg
gtgcccggcgacaccgacatcgagccggaatcctcagcgccactggccaagctcttggac
ttcattgccgagcgcggagagcagcgccacgacctgatccacgagatcgacggcatcgtc
atcaaggtcgacgatttcggcctccaggcccagctcggtcacacctcccgcaccccgcgc
tgggcggtcgcctacaagtacccgccggaagaagtgcacacccggctgctcgacatcaag
gtcaacgtcggacggaccgggcgagtgacgccttacgccgtgatggaacccgtgctggtg
gccgggtccacggtctcgatggccactctgcacaaccaggacgtggtgcgggctaagaac
gtcaagatcggcgacaccgttgtgctgcgcaaagccggagacgtcatccccgaaatcgtg
ggaccggtgctgcccctgcgcgaacagcatgaacgcgacggcgagctgcgcgacttcgtg
atgcccacccactgtccgtcatgtggtgaaccgttggcgccagccaaagaaggcgacgtc
gaccttcgctgcctcaacgcccaccgctgcccggcgcagctcaccgggcgcatcgagcac
gcaggatcccgcggcgccttcgacatcgaggcgctgggggaggaagccgctacctggctc
actaacggcccgggggaggacccggccgagaatcatggacacgtccagcccgctggtgag
ggcgtcatcaccgccgatgcgcagctcttcgacctggccgctgacggcgacgaggagctc
aagcagcgcctcgcggaagtgcgcgtctggcgggagaagcgcagcaaaggccagggcacc
ggaaaatgggagctggtgccgtacttctacaccaaggccaccgctaagaccccttcaaag
cccaccgccaatacggtgaagctcttcgacgagttggagaaggccaagtcccaaccgctg
tggcgcgtgctggtggcactgtccattcgccacgtgggccccaccgccgcccgcgcgctc
gccggtgccttcggctccctgccgcagctgcaagccaccgccctggatgaggagaacggc
cgccagcgactgtccgacgtcgacggcgtgggaccgacgatcgccgacgccgtgtccgaa
tggttccgtgacgaggtcaatcgcaccaccgttgagcgctgggccgcggccggggtccgg
atggaagacgagatggatgaatccgtcgcaaagacgctcgagggactgaccgtcgtggtc
acggggtcgctgcagaactacacccgcgactcggcgaaggaagcgatcatctcccgcggc
ggtaaagcctcggggtcggtgtcgaagaagaccgacttcgtggtcgctggcgagaacgcc
ggttccaaactcgacaaagcagaatcgctgggactcaccgtgctcgacgaagacggtttc
accgcgttgctgaagaacggtcctagtggagtggacgaagggtcggtatag
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