Chelonia mydas (green sea turtle): 102929303
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Entry
102929303 CDS
T02989
Name
(RefSeq) HLA class II histocompatibility antigen, DR alpha chain isoform X1
KO
K06752
MHC class II antigen
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04145
Phagosome
cmy04514
Cell adhesion molecules
cmy04672
Intestinal immune network for IgA production
cmy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102929303
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102929303
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
102929303
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102929303
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmy04147
]
102929303
Exosome [BR:
cmy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102929303
Exosomal proteins of epithelial cells
102929303
Exosomal proteins of breast milk
102929303
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_II_alpha
C1-set
Ig_3
Ig_2
ig
Motif
Other DBs
NCBI-GeneID:
102929303
NCBI-ProteinID:
XP_037769697
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Position
14:complement(43848248..43904558)
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AA seq
258 aa
AA seq
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MGAGRGVPMAQLALLTLLALPGAGAVTAENMLSQVAFYQRTDPAQQEAGEFMFEFDQDEI
FHVDLERKETVWRLPDFGKFTSFEAQGALGNIAVLKKNMEIMIQRSNRTRAQNVPPEVTV
FPEDPVELGEPNILICFVDKFSPPVLSMTWLKNGQEVTGGVSETDFYPRQDNSFRKFSYL
PFLPSQGDFYDCRVEHWGLPEPFTKHWEVQVPTPVPETTETLVCALGLAVGIIGIIAGTI
LIIKGMKMNAARNPRGPL
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcaggacggggcgtccccatggcccagctggccctgctcaccctgctggccctg
ccgggcgccggggcggtgacagcggagaacatgctctcccaggtggccttctaccagcgc
acggacccggcccagcaggaggccggggagttcatgttcgagttcgaccaggacgagatc
ttccacgtggacctggagaggaaggagaccgtctggcgcctgcccgacttcggcaagttc
accagcttcgaggcgcagggcgccctgggcaacatcgccgtgctgaagaagaacatggag
atcatgatccagaggtcaaaccgcacgcgggcccagaacgtgccccctgaggtgaccgtg
ttccccgaagaccccgtggagctgggggagcccaacatcctgatctgcttcgtggacaag
ttctccccacccgtgctcagcatgacgtggctgaagaatgggcaggaggtgacggggggc
gtctctgagaccgacttctacccccgccaggacaactccttccgcaagttctcctacctg
cccttcctccccagccagggcgacttctacgactgccgggtggagcactgggggctgccc
gagcccttcacgaagcactgggaagtccaggtgcccacccccgtccccgagaccaccgag
accctggtgtgcgccctgggcctggctgtgggcatcatcggcatcatcgcgggcaccatc
ctcatcatcaagggcatgaagatgaacgccgcccgcaacccgcggggccccttataa
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