Chelonia mydas (green sea turtle): 102929320
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Entry
102929320 CDS
T02989
Name
(RefSeq) toll-like receptor 8 isoform X1
KO
K10170
toll-like receptor 8
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
102929320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cmy04054
]
102929320
04090 CD molecules [BR:
cmy04090
]
102929320
Pattern recognition receptors [BR:
cmy04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
102929320
CD molecules [BR:
cmy04090
]
Proteins
102929320
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
TIR
LRR_6
TIR_2
LRR_9
LRR_5
LRR_NXF1-5
LRR_12
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
102929320
NCBI-ProteinID:
XP_007060318
LinkDB
All DBs
Position
1:132409723..132459235
Genome browser
AA seq
1039 aa
AA seq
DB search
MATMPHNLFFLLLLIQPEFGLSTHHQWVSKVLPCKIKAKQNSSSILLDCSKQKLRAVPQE
IYTNVTGLILSFNWIEVISKKDFHNFKDLTFFKLNWNWHVKPEESNFDLSPKPLQILDAT
FSNLRHLQELHLNGNQLTRVPAGISPSITSLSLKSNNIVTISKNTFKELTKLKELYMDQN
CYYGNDCEKPFNMEEGALSALTSLTVLSLSYNNLTRVPPKLPVSLQELYLSHNKIKNISQ
NDFKKLVHLKVLDLSGNCPKCFNTPFPCEPCTGNSAIQIHPLAFQNLKKLKTLVLSSMSL
TSVPAIWFENMPELEVLHLASNFLMSEIATGKFLQNLSSLEELDLSFNYQKQIYSRYLNL
STYFSSLVSLKQLYIKGYVFKELDKLHLEPLFALRKLNVLDLGINFIKRVDMSVFQAFRN
LTEIYLKENKIFPQTEKHVFLKSFEKEDYLINYHRTLVWKYKLNPPVIYSDKKKQSCDFL
HQLCTSYGTALDLSLNNIFFINPNQFKGFGDIACLNLSSNALGQAFNGTELIYLSNLKYL
DLSFNKLDLTSSSAFKELPNLEVLDLSYNKHYFLVTGFAHQLLFTENLPNLKILNLSWND
ISALTKFELRSDSLQKLDFKGNRLDILWKNGEMNHIQLFKHLKKLTHLDISYNRLRNIPT
RAFQNLPQSLTKLYINNNKIHTLSWENLRYFKSLKLLDLSQNKLKAVDIQYNYTQSLQTL
LLRENKISRIVVGLPERVSSLLYLDLSYNELQVLNQSTFLSGLIQHLKVLKLKGNPFDCT
CKNSNFIRWIQKTKTPISQVARNVICMNPEDQRQHSVLLIDLHACILDSVAKILFYISFS
TIISIMMVAVTKHLFYWDVWYTYHSCMAKIKGYKSITTDKALYDAYIAYDTQDATVTDWV
INELRFRLEENGDKHVLLCLEERDWEPGKAVIDNLAQSIHHSRKTVFVLTERYVKNGNFK
TAFYIALQRLMDENTDVIVFILLEPVLQHSQYLRLRRRICKSSVLDWPKNPHAEGLFWQR
LKSAVLTDNSMRDDGVYSI
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggctaccatgccccacaacctgttcttcttactcctcctgattcaacctgagtttggt
ctctccactcatcatcaatgggtttctaaggttctaccttgtaaaataaaagcaaaacag
aatagctcctccattctccttgattgcagtaaacaaaagctgagagcagtccctcaggaa
atatatacaaatgttactggcttgatattgtctttcaactggattgaagtgatttctaag
aaggattttcacaactttaaggaccttacattttttaaattaaactggaattggcatgtt
aagccagaagaatctaattttgatttgtctccaaaacctttacaaatactagatgcaact
ttttcaaacttaagacacttacaggaattacatcttaatggcaatcagctaaccagagtg
cctgcagggatttcaccgagcattacttcgctaagtctaaagtccaataacattgttact
attagcaagaacactttcaaagaactcacaaaattgaaggaactctatatggaccagaac
tgttactatggtaatgattgtgaaaaacctttcaacatggaagaaggggctctttcagcc
ctcaccagtttgactgtgctgtcactttcctacaacaacttgacccgggtgccacccaaa
ctgcctgtgtcactacaagaactttatttgagccataacaagataaagaacatcagtcaa
aatgattttaagaaactagttcatctaaaagttcttgatttaagtgggaactgtccaaaa
tgcttcaatacaccttttccttgtgaaccctgcactggaaactctgccattcaaatacat
cctctggctttccagaatcttaaaaaattaaagactttggttctatccagcatgtcactc
actagtgtacccgctatttggtttgaaaacatgccagagctagaggtgctgcaccttgca
tctaacttcttaatgagcgaaatagctactggaaaattcttgcagaatttatcttcttta
gaggaacttgacctatctttcaactaccagaaacaaatatactcacgatatctaaacctc
tcaacatacttttcttctctagtatctctaaaacaattatatattaaaggttatgtcttc
aaagaattagataaactgcacttggaacctttgtttgctttgagaaagctaaatgtcctt
gaccttggaataaattttattaaaagagttgatatgtctgtcttccaggcttttagaaac
ctcacggaaatatacttgaaagaaaacaaaatattcccacaaacagaaaagcatgttttt
ttaaaatcatttgagaaagaggactatttgatcaattatcatcgtaccttggtgtggaaa
tacaagttgaaccctcctgtcatatattctgataaaaaaaagcaatcatgtgacttcctt
caccagctttgtacctcatatggcacagccttggatttgagtttaaacaatatcttcttc
attaacccaaatcagtttaaaggctttggggatatagcttgtttgaatttgtcttcaaat
gcccttggccaggctttcaatggcactgaattaatctatttatctaatctcaaatattta
gatctctcatttaataaactggatttgaccagttcctctgcatttaaagaactacctaac
ctagaggtattagatcttagctataacaagcactattttctagtgacaggttttgcacat
cagctcctatttactgaaaaccttcctaacttaaaaattttaaatttaagctggaatgac
atttctgccctaacaaaatttgaactaaggagtgactcccttcaaaaactagacttcaaa
ggaaaccgtcttgatatcttatggaaaaatggagaaatgaatcacatacaattgtttaag
catctaaaaaagctgacacatctagatatctcatacaacagacttcgaaatatccccact
agggctttccaaaatctgcctcagagcttaactaaattgtatataaataacaacaaaata
cataccctcagctgggaaaatcttagatactttaagtctctgaagttgcttgacttaagt
cagaacaaactgaaggctgttgatatccagtacaactacacacagtccctccagactctg
ctgctgagggagaacaagatttccaggattgttgttgggttgcctgagagagtcagcagc
ctcctgtacctggatttgagttataacgaactgcaagtcttaaatcagtcaactttctta
tcaggacttatacaacatttgaaggttttaaaattaaaagggaatccatttgactgcact
tgcaaaaacagcaacttcataagatggatacagaaaaccaaaactccgatctcacaagta
gccagaaatgtcatttgcatgaaccctgaggaccaaaggcagcatagcgttctcttaatt
gacctgcatgcttgcattctggatagcgttgcaaaaatattattttatatttctttctcc
actattattagcattatgatggtagcagttactaaacatttattttattgggatgtctgg
tatacttatcattcttgtatggcaaaaataaaaggatacaaatctataaccacagacaaa
gctctctatgatgcttacatcgcctatgatactcaggatgcaacagtaactgactgggta
ataaatgaactacgatttcgtctagaggaaaacggagacaagcacgttctactttgtttg
gaggaaagggactgggagccgggaaaggctgtcattgacaaccttgcacagagcatccat
cacagcagaaagaccgtctttgttctaaccgaaagatatgtgaaaaatgggaacttcaaa
accgctttttatatcgctctgcagaggctaatggatgagaatacagatgtgattgtgttc
attctactggagccggtgctacagcattcccagtacctgaggctgaggaggaggatctgc
aagagctctgttcttgactggcctaagaatccacatgctgaaggccttttctggcaaaga
ctaaaaagtgcagtgctaacggataacagcatgcgagatgatggggtgtacagtatatag
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