Chelonia mydas (green sea turtle): 102932974
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Entry
102932974 CDS
T02989
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy00514
Other types of O-glycan biosynthesis
cmy04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
102932974 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
102932974 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cmy01003
]
102932974 (RFNG)
Enzymes [BR:
cmy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
102932974 (RFNG)
Glycosyltransferases [BR:
cmy01003
]
Glycan extension
O-Glycan
102932974 (RFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
102932974
NCBI-ProteinID:
XP_007063423
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All DBs
Position
14:436974..448027
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AA seq
402 aa
AA seq
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MTLSCIGLNKICFLLSVTFCAFLLLLIPKFQTTWRHRGYPQPRPPPPFNASCKSEFYHHQ
ADPSSTDHLDSEGTDTAHSVKDETVEKWGDYSLRAGGSSLKLEEQDGSPTSSLNTMLKDH
HGPAGDSIKENLELKDIFIAVKTTRKYHKTRLDLLFQTWISQAKRQTFIFTDWEDRELRL
RAGDHMINTNCSAVHTRQALCCKMSVEYDKFLESGRKWFCHVDDDNYVNPQNLLRLLSAF
SHSQDVYVGRPSLDHPIEAADHVRSDGSTTVKFWFATGGAGFCISRGLALKMSPWASLGN
FISTAERVRLPDDCTIGYIIEGLLEVKLLHSPLFHSHLENLQRLQGETVLQQVTLSYGGP
ENKHNVVSVAGVFGLQQDPTRFRSVHCLLYPDTTWCPTKNIL
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgacactttcctgcattggactcaataagatctgcttcctgctgtccgtgaccttctgt
gctttccttctcctgctaatccccaaattccagactacgtggaggcataggggatatcca
caaccccgtccaccacctccttttaatgcttcctgcaaaagtgagttctaccaccatcag
gcagatcccagctcaacagaccatttggacagtgagggaactgatactgcacacagtgtg
aaagatgaaactgtagaaaaatggggggattacagcctacgggctgggggatccagcctg
aaacttgaggagcaggatgggagccctaccagttctcttaacactatgttgaaggaccac
catggacctgcaggtgattccattaaggagaatttggagctgaaggatatttttattgct
gtgaaaacgacaagaaagtatcataaaactaggctggacttgctcttccaaacctggatt
tcgcaggccaaaagacagacgtttatattcacagattgggaggaccgtgaactgcgccta
agagcaggagaccacatgatcaacaccaactgctctgctgttcacacccgccaggcactc
tgctgcaagatgtctgtggaatacgataaattcctcgaatctgggagaaaatggttttgc
catgtggatgatgacaactatgtgaatccacagaatctcctgcgtctcttgtctgccttc
tcacacagccaggatgtatatgtggggaggccaagcctggaccaccccattgaggcagcg
gaccatgtccggagtgatggatcaacaactgtgaagttctggtttgccacaggtggagca
gggttctgtatcagcaggggccttgccctgaagatgagtccctgggccagcttgggtaac
ttcatcagcactgcagagagggtccgtcttcctgatgactgcaccatcggttacatcatc
gaggggctgctagaggtgaagctgctgcacagccccttgttccattcccatctggagaat
ctgcagcgactacaaggcgagacagtgctgcagcaggtcaccctgagttacgggggccct
gagaacaaacacaatgttgtgagtgtggcaggagtgtttggcttgcagcaagatccaacc
cgattcagatctgtccattgtcttctctaccctgacactacctggtgtcccactaaaaat
atactgtga
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