Chelonia mydas (green sea turtle): 102935774
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Entry
102935774 CDS
T02989
Name
(RefSeq) HLA class II histocompatibility antigen, DR alpha chain-like isoform X1
KO
K06752
MHC class II antigen
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04145
Phagosome
cmy04514
Cell adhesion molecules
cmy04672
Intestinal immune network for IgA production
cmy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102935774
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102935774
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
102935774
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102935774
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmy04147
]
102935774
Exosome [BR:
cmy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102935774
Exosomal proteins of epithelial cells
102935774
Exosomal proteins of breast milk
102935774
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_II_alpha
C1-set
Ig_3
ig
Motif
Other DBs
NCBI-GeneID:
102935774
NCBI-ProteinID:
XP_037769677
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Position
14:complement(43957222..43971504)
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AA seq
274 aa
AA seq
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MTPGAGALGKHKNCPETRDTILRAGNTEFLRLLSARLRAAALPAENMLSQVAFYQRTDPA
QQEAGEFMFEFDQDEIFHVDLERKETVWRLPDFGKFTSFEAQGALGNIAVLKKNMEIMIQ
RSNRTRAQNVPPEVTVFPEDPVELGEPNVLICFVDKFSPPVLSMTWLKNGQEVTGGVSET
DFYPRQDNSFRKFSYLPFLPSQGDFYDCRVEHWGLPEPFTKHWEVQVPTPVPETTETLVC
ALGLAVGIIGIIAGTILIIKGMKMNAARNPRGPL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgactcctggagctggggctttaggaaaacacaagaattgtcctgagactcgtgacaca
atcctgagagccgggaacactgaatttctccgtctcctctcggcgaggctccgcgctgct
gctctgcccgcggagaacatgctctcccaggtggccttctaccagcgcacggacccggcc
cagcaggaggccggggagttcatgttcgagttcgaccaggacgagatcttccacgtggac
ctggagaggaaggagaccgtctggcgcctgcccgacttcggcaagttcaccagcttcgag
gcgcagggcgccctgggcaacatcgccgtgctgaagaagaacatggagatcatgatccag
aggtcaaaccgcacgcgggcccagaacgtgccccctgaggtgaccgtgttccccgaagac
cccgtggagctgggggagcccaacgtcctgatctgcttcgtggacaagttctccccaccc
gtgctcagcatgacgtggctgaagaacgggcaggaggtgacggggggcgtctctgagacc
gacttctacccccgccaggacaactccttccgcaagttctcctacctgcccttcctcccc
agccagggcgacttctacgactgccgggtggagcactgggggctgcccgagcccttcacg
aagcactgggaagtccaggtgcccacccccgtccccgagaccaccgagaccctggtgtgc
gccctgggcctggccgtgggcatcatcggcatcatcgcgggcactatcctcatcatcaag
ggcatgaagatgaacgccgcccgcaacccgcggggccccttataa
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