Chelonia mydas (green sea turtle): 102936019
Help
Entry
102936019 CDS
T02989
Symbol
HMGCS1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X4
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy00280
Valine, leucine and isoleucine degradation
cmy00650
Butanoate metabolism
cmy00900
Terpenoid backbone biosynthesis
cmy01100
Metabolic pathways
cmy03320
PPAR signaling pathway
Module
cmy_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
102936019 (HMGCS1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
102936019 (HMGCS1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
102936019 (HMGCS1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
102936019 (HMGCS1)
Enzymes [BR:
cmy01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
102936019 (HMGCS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
Cullin
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
102936019
NCBI-ProteinID:
XP_027673283
LinkDB
All DBs
Position
5:complement(29504767..29540537)
Genome browser
AA seq
522 aa
AA seq
DB search
MPGSLPVNAEACWPKDVGIVALEIYFPSQYVDQTELETFDGVDAGKYTIGLGQSKMGFCS
DREDINSLCLTVVQKLMERNSLSYDCIGRLEVGTETIIDKSKSVKTVLMQLFEDSGNTDV
EGIDTTNACYGGTAAIFNAVNWVESSSWDGRYALVVAGDIAVYATGNARPTGGAGAVAML
IGPNAPLIFERGLRGTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDRCYFVYRNKI
RAQWQKEGSDREFTLNDFGFMIFHSPYCKLVQKSVARLLLNDFLSDQNSKTENGIYSGLE
AFRDVKLEDTYFDRDVEKAFMKASAELFNQKTKASLLVSNQNGNMYTPSVYGCLASLLAQ
YSPQQLAGQRIGVFSYGSGFAATLYSIRVTQDATPGSSLDKITASLSDLKTRLDSRKCIA
PDVFAENMKIRQETHHLANYIPQCSVNDLFEGTWYLMRVDEKHRRTYARRPVLGDGPLEA
GADIVHSSIVHELIPSPAKKVPRIPATKESEAVAVSVANGEH
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggtctcttcctgtgaatgctgaagcctgttggccaaaagatgtgggaattgtt
gccctggagatctattttccttctcagtatgttgaccagacagaattggaaacatttgat
ggtgtggatgctgggaagtacaccattggcttgggtcaatcgaagatgggattctgctca
gatagagaggatatcaactcactctgcttgactgtggtacagaagcttatggagaggaac
agtctctcctatgattgcattgggagattagaagttggaacagagacaatcattgacaag
tcaaaatctgtaaagactgtcctgatgcagctctttgaggattctggtaatacagatgta
gaagggattgacacaacaaatgcatgctatggaggcactgctgctatctttaatgctgtt
aactgggttgagtccagttcttgggatggtcgttatgcgcttgttgttgctggagacata
gctgtgtatgccactggaaacgccaggccaaccggtggagctggtgctgttgctatgtta
attggtccaaatgctcctttaatttttgagagaggactgcgtgggacccatatgcaacat
gcctatgacttttataagccagatatggtatctgaatatcctgtagttgatggtaaacta
tctattcagtgctacctcagtgcattagatcgctgctattttgtctaccgcaacaaaatc
cgtgctcagtggcaaaaagaaggaagtgacagagagtttaccttgaatgactttggcttc
atgatcttccattctccatactgtaaacttgtacagaaatctgtggctcgactgttgttg
aatgactttcttagtgaccagaactctaaaacagaaaatggtatctatagtggcttggaa
gcttttagggatgtaaaactggaggatacctactttgacagagatgtggagaaggccttt
atgaaagctagtgctgaactctttaatcagaaaaccaaagcttctttacttgtatccaat
caaaatggaaacatgtacaccccttcagtctatggctgccttgcttctcttctagcacag
tactccccacagcagctagcaggacaaagaattggtgtgttctcctatggctctggtttt
gctgctacactctactccattagagttacacaggatgccacaccaggttcttctctggat
aaaataactgctagcctgtctgatctgaaaacaagacttgactcaagaaagtgtattgca
ccggatgtctttgctgaaaacatgaagattagacaggaaacgcatcacttggccaactac
attccgcagtgttcagtgaatgatctctttgagggaacgtggtacctaatgcgagtggat
gaaaaacacagaagaacttatgctcgacgtccagtgctgggtgatgggcctttggaagca
ggagctgatattgtccattcaagcatagttcatgagcttatcccaagccctgctaagaaa
gtgccaagaatccctgcaacaaaagaatctgaagctgttgctgtctctgttgccaatgga
gagcattaa
DBGET
integrated database retrieval system
