Chelonia mydas (green sea turtle): 102936332
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Entry
102936332 CDS
T02989
Symbol
TNF
Name
(RefSeq) tumor necrosis factor
KO
K03156
tumor necrosis factor superfamily, member 2
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04010
MAPK signaling pathway
cmy04060
Cytokine-cytokine receptor interaction
cmy04150
mTOR signaling pathway
cmy04210
Apoptosis
cmy04217
Necroptosis
cmy04350
TGF-beta signaling pathway
cmy04620
Toll-like receptor signaling pathway
cmy04621
NOD-like receptor signaling pathway
cmy04622
RIG-I-like receptor signaling pathway
cmy04625
C-type lectin receptor signaling pathway
cmy04920
Adipocytokine signaling pathway
cmy05132
Salmonella infection
cmy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102936332 (TNF)
04350 TGF-beta signaling pathway
102936332 (TNF)
04150 mTOR signaling pathway
102936332 (TNF)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
102936332 (TNF)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
102936332 (TNF)
04217 Necroptosis
102936332 (TNF)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
102936332 (TNF)
04621 NOD-like receptor signaling pathway
102936332 (TNF)
04622 RIG-I-like receptor signaling pathway
102936332 (TNF)
04625 C-type lectin receptor signaling pathway
102936332 (TNF)
09152 Endocrine system
04920 Adipocytokine signaling pathway
102936332 (TNF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102936332 (TNF)
09171 Infectious disease: bacterial
05132 Salmonella infection
102936332 (TNF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cmy04052
]
102936332 (TNF)
00536 Glycosaminoglycan binding proteins [BR:
cmy00536
]
102936332 (TNF)
Cytokines and neuropeptides [BR:
cmy04052
]
Cytokines
Tumor necrosis fators
102936332 (TNF)
Glycosaminoglycan binding proteins [BR:
cmy00536
]
Heparan sulfate / Heparin
Cytokines
102936332 (TNF)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
102936332
NCBI-ProteinID:
XP_027677269
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All DBs
Position
14:43154378..43159145
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AA seq
240 aa
AA seq
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MSTESLVCDVEKGGVIVVRESRPGDGRWKCLSVCSFLLLMGATAVFALLHFRNGGPLVSQ
DPKEPRSSGHTQQLTGPMTMKLQAQSLNKPAAHVVASTDSKELIWTDEVAHTMMQNGMAL
VNNKLVVPSDGLYFIYSQVVFKGDKCPEESIYLQHTIFRYSVEYPENVALLRAIKSFCEG
SKAAKDEKGVQFESIYQGAVFQLMKGDEISSEIHSAQYLDLNSNGQVYFGVIALELGVPQ
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgaaagtctggtctgcgacgtcgagaaggggggcgttatcgtggtgcgggag
tcgcggcccggcgacggccgctggaagtgtctcagcgtctgctccttcctgctgctgatg
ggagccacggccgtcttcgctctgctgcatttcagaaacggggggcccctggtgagccag
gaccccaaagaacccaggagttcgggccacacgcagcaactcacaggtccgatgacgatg
aagttgcaagcccagtcgctgaacaagccagctgcccatgtcgtcgcatccactgactcc
aaagagctgatctggactgacgaagtggcacacaccatgatgcagaacgggatggcactg
gtaaacaacaagttggtggtcccgtccgacggcctctacttcatctactcccaggtggtc
ttcaagggagacaaatgtccggaggagtccatttatctccagcataccatctttcgctac
tccgtagagtacccagaaaacgttgccttgctgagggccatcaagtcgttctgcgagggg
tccaaggcagccaaggacgagaagggggtacagttcgagtccatctaccaaggagctgtc
ttccagttgatgaaaggcgacgagatctcctctgaaatccactcggcccaatatttagat
ctgaacagcaatgggcaggtgtattttggggtgatcgcattggaattaggagttccccaa
taa
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