Chelonia mydas (green sea turtle): 102937828
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Entry
102937828 CDS
T02989
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X6
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy00310
Lysine degradation
cmy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102937828 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmy03036
]
102937828 (SETDB1)
Enzymes [BR:
cmy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
102937828 (SETDB1)
Chromosome and associated proteins [BR:
cmy03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
102937828 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
102937828 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
SET
MBD
Pre-SET
Chromo_MORC2_6th
DUF4537
Motif
Other DBs
NCBI-GeneID:
102937828
NCBI-ProteinID:
XP_037739545
LinkDB
All DBs
Position
24:7818628..7849939
Genome browser
AA seq
1306 aa
AA seq
DB search
MGPAAKMDSPEVTELQQEVMEELGISMEELQQFIDEELEKFECVKQRKQQLEELEKSVEQ
KEAEVAYVDQLFNDASRAIGKCEILVKDLYSKLGLQYRESSSEDEDSASKPMEVIEIPDE
DDDDVMSIDSGWKRSETSNRISKDQTLLREAMAAMRKSAQDVQKFMEAVNKKTNAQDLQK
DGLSSPPSSVGASQQVSSALAGSDLSNDGDLVVGMRILGKKRTKTWHKGILIAIQAVGAG
KKFKVKFDNKGKSLLSGNHIAYDYHPSAEKLYVGSRVVAKYKDGNQVWLYAGIVAETPNM
KNKLRFLIFFDDGYASYVTQSELYPICRPLKKTWEDIEDVSCRDFIEEYISAYPNRPMVL
LKSGQLIKTEWEGTWWKSRVEEVDGSLVKILFLTDAVNVTMFSLPQDDKRCEWIYRGSTR
LEPMFSMKTSTASALEKKQGGQMRTRPNVGAVRSKGPVVQYTQELTGTSTQFKPIEQIQA
MSLAAPSVSPQPAEMESPESQLAQSRKQVAKKSTSFRPGSVGSGHSSPVSPVLSETPPMG
KAAVNQQYRGSYSSGQPGSSAVQPFHGMMDRVPNEPSYRAPMEKLFYLPHVCSYTCLSRV
RPIRSDQYRSKNPLLIPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYIF
ETDCDFLFLEMFCLDPYVLVDRKFQPYKPFYYIADITKGKEDVPLSCVNEIDTTPPPQVA
YSKERIPGKGVYINTGWEFLVGCDCKDGCRDKSKCACHQLTVQATGCTPGGQINPNSGYQ
HKRLEECLPTGVYECNKRCKCNTNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKG
SFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDAKCSSDSSGVDLK
DEEEENTGTEEQDESNEDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSETASKD
SGLTRQISHDEVAMTAACKLPVSEETSKNKVASWLSSNSMSDSFQDNDSASSFKMTEASE
VKAGKVEVLGDREKPSTSGLGGKEAFGLDADSKMQKKEESEEPNKLSLASETGKVYGYNP
SPMKLEGIRRPPSKTIMHQSKRHLAPPQQAADDVLTLSSSTDSEGENGQPAAGQAQGNTN
DSDDIQTISSGSEEEDIDDKKNSSSGLGPIKRQVAVKSTRGFALKSTHGIAIKSTNMASA
DKGENMLVRKNTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFP
WVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgggaccagcggcaaaaatggattcgccggaagtaacagagttgcagcaagaagtgatg
gaagagttggggatctctatggaagagctccagcaattcattgatgaggagctggagaag
tttgagtgtgtgaagcagcggaaacagcagctggaagagctggaaaagagcgtggaacag
aaagaagcagaagtggcatatgtcgaccagctcttcaatgatgcttcaagagccattggt
aaatgcgagatactggtaaaagatctctactccaagctgggccttcagtatcgtgagagc
agctctgaagatgaggactcagcttccaagccgatggaagtgatcgaaatcccagatgag
gatgacgacgatgttatgagtattgattcgggttggaagcgcagtgaaacaagtaacaga
atctcaaaggatcagacgctgcttcgagaagccatggctgcgatgaggaagtctgcccaa
gatgttcagaaatttatggaagctgttaacaaaaaaacaaatgcccaggacctgcaaaaa
gatgggctgtcctctcctccgagctctgttggcgcatcccagcaggtgagctctgcgctt
gctgggagtgacctcagcaatgatggtgacctggtggttggtatgcgtatcctaggcaag
aaaaggaccaagacgtggcacaaaggaattttgattgcaatccaggcagtaggtgctggt
aagaagttcaaagtgaaattcgacaacaaagggaagagtttgctttctggcaatcacatt
gcgtatgactatcatccctctgccgagaaactctacgtcggaagccgggttgtggccaaa
tacaaggatgggaatcaagtctggctctatgctggcatcgtggccgaaacgccgaacatg
aagaataaactgaggttcctgatcttcttcgatgatggctatgcttcttacgtcactcag
tcggaactgtacccgatctgcaggccattaaagaagacctgggaagacatagaagacgtt
tcctgtcgtgatttcatagaggagtacatcagtgcttacccaaaccgtcccatggtatta
ctgaagagcggccagctgattaaaacagaatgggaagggacctggtggaaatccagagtg
gaggaagtggatggcagtctggtcaaaatcctcttcctgacagatgctgtgaatgttaca
atgttctctctgccacaggacgacaaacgctgcgaatggatttaccgtggttccacacgt
ctggagcctatgttcagcatgaaaacctccacggcctccgctctggaaaagaaacaagga
gggcagatgaggactcgtcccaatgttggtgctgtgaggagcaaagggcctgtagtacag
tacacgcaagaattaacaggaaccagcactcagtttaaacctatagaacaaatccaagca
atgtctctagctgcaccgtctgtttccccacagcctgctgagatggaaagccctgaaagt
cagctggctcagtccagaaagcaagtggccaagaaaagcacgtccttccgtcctggctct
gtggggtctggacactcttcgcctgtttctcctgtcctaagtgaaactcctcccatgggg
aaagctgcagtgaaccagcaatatcgtggaagctattccagtggccagccaggcagcagt
gcggtgcagccattccacggcatgatggatcgggtgcccaatgagccctcataccgggcc
ccgatggagaagctcttttacctgccccacgtctgcagctacacctgcctgtcgcgggtc
cgccccatccggagcgaccagtaccgcagcaagaacccccttctcatcccgcttctctac
gacttccggcgcatgactgcccgccgccgcgtcaaccgcaagatgggcttccacgtcatc
tacaagacgccctgcgggctgtgcctgcgcaccatgcaggagattgagcgctatatcttt
gagacggactgtgacttcctcttcctggagatgttctgcctagacccctatgtgctggtg
gaccgcaagttccagccctacaagcccttctactacattgcagacatcaccaaaggcaag
gaggacgtgccgctgtcctgcgtcaatgagatagacactacccctcctccacaggtggct
tatagcaaggagcgcatcccggggaaaggagtctatatcaacaccggctgggagttcctc
gtgggctgcgactgtaaagacggctgccgagacaaatctaaatgtgcctgccaccagctg
acagtccaagcaacaggctgcacccccggtgggcagatcaaccccaattctggctaccag
cacaagaggctggaggaatgcctcccgacaggagtctatgaatgtaacaagagatgcaaa
tgcaacacaaacatgtgcaccaatcgcttggtacaacatggactccaagtcagactccag
ctattcaagactcagaacaaaggctggggaatccgctgccttgatgatattgccaagggc
tcttttgtctgcatctatgcagggaaaatcctgacggacgactttgccgacaaagaaggg
ctggagatgggggacgagtacttcgccaacctggatcacattgagagcgtggagaacttc
aaggagggctacgagagcgatgccaagtgctcctccgacagcagtggcgtggacctgaag
gacgaagaggaagagaacaccggcaccgaggagcaggatgagtccaacgaggacagctct
gacgacaacttctgcaaggacgaggatttcagcaccagctcggtgtggcgcagctatgct
acccgccggcagacccggggccagaaggagaatggcctgtctgagacagcctccaaggac
tccggcctcaccaggcagatcagccacgacgaggtcgccatgaccgccgcctgcaaactg
cctgtgtctgaggagacctccaaaaacaaagtggcctcatggctgagctccaacagcatg
tcggacagcttccaggacaatgatagcgcctcctcgttcaagatgaccgaggccagcgag
gtcaaggcaggcaaagtggaagtcctgggtgatcgagagaagccctccacttctgggctt
gggggcaaggaggcctttggcttggatgcagactcaaagatgcagaagaaggaggaatct
gaagagccaaacaagctttcgctggcatctgagacaggcaaggtgtatggctataatcca
agccctatgaaactcgaggggatccggaggccaccaagcaagacgatcatgcatcagagc
aaaaggcacttggctcctcctcagcaagcagctgacgatgtgctgacactgtcaagtagc
acggacagcgagggggagaatggccagccggcagcaggacaagcgcagggcaacacgaat
gatagtgatgacatccagacgatttcctctggctccgaggaagaggacatcgatgataaa
aagaattcctcttccgggctaggtcccattaaaaggcaagtggcagtgaagtccacacga
ggttttgccctcaaatcgactcacgggattgccataaagtcgaccaatatggcatcagct
gacaagggggagaacatgctcgtgcgcaaaaacacccgccagttttatgacggcgaagag
tcctgctatatcattgatgccaaactcgaagggaacctcggccgttacctcaatcatagc
tgcagccccaatctgtttgtgcagaatgtctttgtggacacgcatgatctccgtttccct
tgggttgccttcttcgctagcaagaggatacgagccgggactgagctgacctgggattat
aactacgaggtgggcagcgtggagggcaaggaactcctgtgctgctgtggagcgatcgaa
tgccgaggcaggctgctctag
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integrated database retrieval system
