Chelonia mydas (green sea turtle): 102940198
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Entry
102940198 CDS
T02989
Symbol
CACNA1C
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1C isoform X1
KO
K04850
voltage-dependent calcium channel L type alpha-1C
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04010
MAPK signaling pathway
cmy04020
Calcium signaling pathway
cmy04260
Cardiac muscle contraction
cmy04261
Adrenergic signaling in cardiomyocytes
cmy04270
Vascular smooth muscle contraction
cmy04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102940198 (CACNA1C)
04020 Calcium signaling pathway
102940198 (CACNA1C)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
102940198 (CACNA1C)
09153 Circulatory system
04260 Cardiac muscle contraction
102940198 (CACNA1C)
04261 Adrenergic signaling in cardiomyocytes
102940198 (CACNA1C)
04270 Vascular smooth muscle contraction
102940198 (CACNA1C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmy04040
]
102940198 (CACNA1C)
Ion channels [BR:
cmy04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
102940198 (CACNA1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
102940198
NCBI-ProteinID:
XP_043396116
LinkDB
All DBs
Position
1:complement(238136550..238844575)
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AA seq
2167 aa
AA seq
DB search
MVNENKRMYIPEENHQGSNYGSPRPAHANMNANAAAGLAPEHIPTPGAALSWQAAIDAAR
QAKLMGSAGNATISTASSTQRKRQQYGKQKKQGTTTATRPPRALLCLTLKNPIRRACISI
VEWKPFEIIILLTIFANCVALAIYIPFPEDDSNATNSNLERVEYLFLIIFTVEAFLKVIA
YGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKADGANSIGGKGAGFDVKALRAFR
VLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFMGKMHKTCYL
VQGGLPEEDPSPCAPQSAHGRQCQNGTVCKAGWEGPKHGITNFDNFAFAMLTVFQCITME
GWTDVLYWMQDAMGYELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQK
LREKQQLEEDLKGYLDWITQAEDIDPENEDEGMDEEKPRNRSTPAGLPDKKKGKFAWFSH
STETHVSMPTSETESVNTDNVAGADIEGENCGARLAHRISKSKFSRYWRRWNRFCRRKCR
AAVKSNIFYWLVIFLVFLNTLTIASEHYNQPDWLTEVQDTANKVLLALFTAEMLLKMYSL
GLQAYFVSLFNRFDCFIVCGGILETILVETKIMSPLGISVLRCVRLLRIFKITRYWNSLS
NLVASLLNSVRSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDEMQTRRSTFDNFPQSLLT
VFQILTGEDWNSVMYDGIMAYGGPSFPGMLVCIYFIILFICGNYILLNVFLAIAVDNLAD
AESLTSAQKEEEEEKERKKLARTASPEKKQEIEKPAMEEETKEEKIELKSITADGESPPT
TKINVDDYQPNENEEKNPYPTTEAPAEEEEEEPEMPVGPRPRPMSELHLKEKAVPMPDAS
AFFIFSPTNRFRLHCHRIVNDNIFTNLILFFILLSSISLAAEDPVRHYSFRNQILGNADY
VFTSIFTLEIILKMTAYGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQSSAINVVKILR
VLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGKLYSC
SDSSKQTEAECRGHYISYKDGEVTHPMIQPRNWENSKFDFDNVLTAMMALFTVSTFEGWP
ELLYKSIDSHMEDVGPIYNHRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEQEYK
NCELDKNQRQCVEYALKARPLRRYIPKNQYQYKVWYVVNSTYFEYLMFVLILLNTICLAM
QHYGQSCPFKQAMNILNMLFTGLFTVEMVLKLIAFKPKGYFSDPWNVFDFLIVIGSIIDV
ILSETNPAEHTQCSSSMNAEENSRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQ
ALPYVALLIVMLFFIYAVIGMQVFGKIALNDTTDINRNNNFQTFPQAVLLLFRCATGEGW
QDIMLACLPDKKCDPESEPTNSTEGDHSCGSSFSIFYFISFYMLCAFLIINLFVAVIMDN
FDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRV
ACKRLVSMNMPLNSDGTVMFNATLFALVRTALRIKTEGNLEQANEELRAIIKKIWKRTSM
KLLDQVVPPAGDDEVTVGKFYATFLIQEYFRKFKKRKEQGLVGKPSQRNALSLQAGLRTL
HDIGPEIRRAISGDLTAEEELDKAMKEAVSAASEDDIFRRAGGLFGNHVSYYQSDGRSSF
PQTFTTQRPLHINKSGNNQGDTESPSHEKLVDSTFTPSSYSSSGSNANINNANNTALSRF
PSPPSYPSTVSTVEGHGTPLSPTIRVQEAPWKLTSKRTHYYETLGRSSSRDSQLAIVCQE
EVSQDEIYDENLNEDLEYCSEPSLISTEMLSYQDDENRQLTPPENNKGEGSKLSPKSGFL
RSSSLGRRASFHLECLKRQKNQGVDVTQKTVLPLHLVHHQALAVAGLSPLLQRSHSPTTF
SPRLCATPPAMPCSRGWPQKTIPTLRLDGVESGEKLNSSFPSIHCSSWYSDSTSCRSPRR
ARPVSLTVPSQTGGSSRQFHGSAGSLVEAVLISEGLMQFAQDPKFIEVTTQELADACDMT
IEEMENAADNILNGNSKQSPNGNLLPFVNCRDPGQDSAGEEEEEVQNPDCRKSQEELQDS
RIYVSSL
NT seq
6504 nt
NT seq
+upstream
nt +downstream
nt
atggtcaatgaaaacaagaggatgtacattccagaagaaaaccatcaaggttccaactat
gggagtccccgtccagctcatgccaacatgaatgccaacgcagctgcagggcttgcccca
gagcatatccctactccaggggcagctctgtcatggcaggctgctatcgatgctgccagg
caggccaaattgatgggtagtgctggcaatgcaacaatatccacagctagctccacgcag
aggaaacgacagcagtatgggaaacagaaaaaacagggtacaaccacagctacacgtcct
ccccgggcattgctgtgtttaacgctgaaaaatcccatccggagggcatgcatcagcatc
gtcgaatggaaaccatttgaaataattattttactgactatttttgccaattgtgtggcc
ttagctatctatatcccctttccagaagatgattccaatgccaccaattccaatctggaa
cgagtggaatatctctttctcataatttttacggtggaagcatttttaaaagtaatagca
tatggacttctctttcaccccaatgcttacctccgcaatggctggaatttactagatttt
ataattgtggtggtagggctttttagtgcaattttagaacaagcaaccaaagcagatggg
gcgaattcaataggagggaaaggtgccggatttgatgttaaagcactgcgggctttccga
gtgttacgccccttacgactggtatctggagttcctagtctccaagtggttttaaattcc
attatcaaggctatggtccccttgctgcacattgccctgctggtgctgtttgtcataatt
atctatgccatcattggactggagctattcatggggaagatgcacaagacctgctactta
gtgcaaggcggattaccggaagaggacccctctccttgtgctcctcaatcagcgcatgga
cggcagtgtcagaatggcactgtgtgcaaagcaggatgggaggggcccaagcatggcatt
accaatttcgacaactttgcctttgccatgttaactgtgtttcagtgcatcactatggag
ggctggacagatgtcctttactggatgcaggacgctatgggctatgagttaccatgggtg
tattttgtcagtctggtcatctttggatcctttttcgttctaaatctggttcttggtgtg
ttgagcggggagttttccaaagaaagagagaaggcaaaggctcggggtgactttcagaag
ttgcgggagaaacaacagctggaggaagacttgaaggggtacctggattggataactcaa
gcagaagacattgatccagaaaatgaagatgaaggcatggatgaggagaagccccgaaac
agaagcactcctgctggcttgcctgataagaagaaagggaagtttgcttggtttagtcac
tccacagaaacccatgtgagcatgcctacaagtgagactgagtccgtgaacacagacaat
gtggcaggagcagatattgaaggagaaaactgcggtgctaggctggcgcatcggatctcc
aaatctaagtttagccgctactggcgccggtggaacaggttctgcaggaggaagtgccga
gccgctgtcaagtccaatattttctactggctggtgatcttccttgtgtttctcaacacc
cttaccattgcctctgaacattacaaccagccagactggctcacagaggtccaagacact
gccaataaggtgctgctagctcttttcacggcagagatgctgctgaagatgtacagctta
ggtctccaggcctactttgtatctctcttcaaccgctttgactgctttattgtttgtgga
ggaatcctggagaccatcctggtggagaccaagatcatgtcaccgctgggcatctcggtg
ttgagatgcgtccgcctcctgagaatatttaaaatcacaaggtattggaactccttgagt
aacctagtggcttcactgctgaactcagtccgctccatcgcttcccttttgctgcttctc
ttcctcttcatcatcatcttctcgctcctgggaatgcagctctttgggggcaagtttaac
tttgatgagatgcaaaccaggaggagcacgttcgataacttcccccagtccctcctcact
gtgtttcagatcctgactggggaggactggaattcggtgatgtatgatgggatcatggct
tatggcggcccctcttttccaggaatgttggtctgtatttacttcatcatcctcttcatc
tgcggaaactatatcctgctgaatgtatttttggccatcgctgtggacaatcttgccgat
gcagagagtttgacatctgctcagaaagaagaggaagaggaaaaagaaaggaaaaaacta
gctaggaccgctagtcctgaaaagaaacaggagattgagaaaccagctatggaggaggag
acaaaggaggagaaaattgagctgaaatcgatcactgctgatggagagtccccacctact
accaagatcaatgtggatgattatcagcccaatgaaaatgaagagaagaacccatatcct
actacagaagctccagcagaggaagaggaggaggagcctgaaatgcctgtcggccctcgg
ccacgcccaatgtctgaactgcacctcaaagagaaggctgtgcccatgccggatgccagt
gcttttttcatcttcagccctaccaacaggtttcgtctccactgccatcgaatcgttaat
gataacattttcaccaacctgatcctctttttcatcttgctcagcagcatctccctggca
gctgaggaccctgtccgacactactcctttaggaaccaaatcctaggcaatgcagactat
gtcttcactagtatctttacattagaaattattcttaagatgaccgcatatggagctttc
ctccacaaaggctccttctgcaggaactacttcaacatcctagacttgctggtggtcagc
gtgtctctcatctcctttgggatccagtccagtgccatcaacgtagtgaagatcttacgt
gtcctgcgagtgctcagaccgctgagggccatcaacagagccaagggactaaagcacgtg
gtccagtgtgtatttgtagccatcagaaccatcggaaatattgtgatcgtcaccactttg
ctgcagttcatgtttgcctgcattggagttcagttgttcaagggcaaactgtatagctgc
agcgatagctccaagcaaacagaagcagaatgcagggggcattatatttcgtacaaagac
ggagaggtcacccacccaatgatccagccccgcaattgggagaacagcaagtttgacttt
gacaacgtcttgactgccatgatggcactcttcactgtttcaacctttgagggctggcca
gagctactgtacaagtccattgattctcacatggaggatgtgggacccatctataaccac
agggtggagatctccattttcttcattatctatatcatcatcattgctttcttcatgatg
aacatcttcgttggtttcgtcattgtcacgtttcaggaacaaggagagcaggaatacaag
aactgtgagctggacaagaaccagcgccaatgtgttgagtatgccctgaaggcccgcccc
ctgcggaggtacatccctaagaaccagtaccaatacaaagtgtggtatgtggtgaattcc
acctattttgagtacctgatgttcgttctcatcctgctgaacaccatctgcctggccatg
cagcactatggtcagagctgtcccttcaaacaagccatgaatatcctcaacatgctcttc
acgggtctcttcaccgtcgagatggttctgaaactaattgccttcaaacccaagggttac
tttagtgatccttggaatgtttttgacttcctcatcgtaattggcagcattatagacgtc
attctcagtgaaactaatccagctgaacatacccaatgctcttcctctatgaatgcagag
gaaaactcgcgcatctcaatcacctttttccgactcttccgtgtgatgcgtctcgtgaag
ctcctgagccgtggggagggcatccggacattgctttggaccttcatcaaatccttccag
gctctcccctacgtggctcttttaatagtgatgttattcttcatctatgcagtgattgga
atgcaggtgtttggtaaaattgctctgaatgataccacggatatcaaccgcaacaacaac
tttcagacgttccctcaagcagtgctgctactcttcaggtgtgccactggtgaaggctgg
caggacatcatgcttgcgtgtctgccagacaagaagtgcgatcccgagtcagagccaacc
aactctactgaaggcgaccattcctgtgggagcagcttttccatcttttatttcatcagc
ttctacatgctctgtgcctttttgattatcaatctttttgtagctgttattatggataac
tttgactacttgacgcgggactggtccattctggggccacatcaccttgacgagtttaaa
aggatctgggcagagtatgaccctgaagccaagggacggatcaaacacctggacgtggtg
acgctgctccggcggattcagcctccgctgggctttgggaagctctgtcctcatcgagtg
gcttgcaaacgcctagtctctatgaatatgccactgaacagtgatgggactgtcatgttt
aatgccaccctctttgcgttggtcagaacagcactgaggatcaaaactgaaggtaacctg
gagcaagccaatgaggagctgcgagcgatcattaagaaaatctggaagcgcaccagcatg
aagctgctggatcaggttgtgcccccggcaggtgatgatgaggtgacagttgggaagttt
tatgccactttcctaatccaagagtatttccggaaattcaagaaacgtaaagaacaaggc
ctcgtgggcaaaccctcacagcggaatgctctctccttgcaggccgggttgcgcacattg
cacgacattgggccagagatccgacgggcgatctccggagacctgacagccgaagaagag
ctagacaaggccatgaaagaagctgtttctgctgcctctgaagatgatatcttcaggagg
gctggtggcctgttcggaaaccatgtcagctactaccaaagtgatggcaggagctcattc
ccccagacattcaccacccagcgccctttgcacatcaataaatctggcaacaaccaggga
gatacggagtccccgtcacacgagaagctagtggattccaccttcactcccagcagctac
tcgtcttcgggctccaatgccaacatcaacaatgccaacaatactgccttgtcccgcttt
cccagcccacccagctacccaagtactgtcagcacggtggaggggcatggcacacccttg
tcacccaccatacgagtgcaggaggccccttggaaactcacttccaaaaggacacattac
tatgaaacattgggacgctccagttccagagacagccagctggcaatcgtttgccaagaa
gaagtgtctcaggatgagatttatgatgagaatttgaatgaagacctagagtactgtagc
gaaccaagcctgatctctactgaaatgctgtcataccaagatgatgaaaacagacaactg
actccacctgaaaacaacaaaggggagggctccaagctgtctccaaagagtggatttctt
cgctcttcatcactgggtcgaagagcatcttttcacttagagtgtctgaagagacagaaa
aaccaaggtgtagatgtcacacagaagacagttctgccattgcatctggtacaccatcag
gcactagcagtggcagggctgagtcccctgctccagagaagccattccccaacaacgttc
tccccccggttgtgtgccacgccccctgccatgccctgtagccgtggctggccacagaag
accatcccgactttacggcttgatggagtggagtccggtgagaaactcaacagtagcttc
ccatcaatacactgcagctcctggtactctgacagcaccagctgcagaagccctcggaga
gccaggccagtctccctcaccgtcccgagccagactggggggagcagcaggcagttccac
ggcagcgctggcagccttgtcgaagcggtcttgatttcagaaggactgatgcagtttgct
caagatccaaagttcattgaggtcacaacccaagagctagcagatgcctgtgacatgaca
atagaagagatggaaaatgcagcagacaacatactcaacggtaacagcaagcagagcccc
aatggcaacctcttgccttttgttaactgcagggacccagggcaggacagtgcaggagag
gaagaggaagaggtgcagaacccggattgtagaaaaagtcaggaggagctccaggacagc
aggatttatgtcagcagcctgtag
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