Chelonia mydas (green sea turtle): 102943153 Help Entry 102943153         CDS       T02989                                  Symbol THBS1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism cmy  Chelonia mydas (green sea turtle) Pathway cmy04115   p53 signaling pathway cmy04145   Phagosome cmy04148   Efferocytosis cmy04350   TGF-beta signaling pathway cmy04510   Focal adhesion cmy04512   ECM-receptor interaction cmy04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cmy00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     102943153 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     102943153 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     102943153 (THBS1)    04148 Efferocytosis     102943153 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     102943153 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     102943153 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     102943153 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cmy04131]     102943153 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:cmy00536]     102943153 (THBS1) Membrane trafficking [BR:cmy04131]  Endocytosis   Phagocytosis    Opsonins     102943153 (THBS1) Glycosaminoglycan binding proteins [BR:cmy00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    102943153 (THBS1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C VWC2L_2nd EGF_3 cEGF TSP1_ADAMTS TSP1_CCN Laminin_G_3 EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  102943153 NCBI-ProteinID:  XP_007069432 LinkDB All DBs Position 6:complement(74947517..74971505) Genome browser AA seq 1176 aa AA seqDB search MELSGGLFLLLMFGVCGANQIPESGGDDNSVFDLFELIGFTRKGAGRRATGVHLVKGPEP SSPAYRIEDASRIPAVPDDKFQDLLDAIYAEKGFILLATLRQAKKSRGTLLAVERKDSSG HIFNLVSNGKAGTLDLSLSGDGKQQVVSVEDALLATGHWKNITLFVQEDRAQLYVGCEKM ENAELDIPIQNIFTRDLASSAKLRIAKGGVNDNFQGVLQNVRFVFGTTLEAILRNKGCSS STSAIITLDNPINGSSPAIRTNYIGHKTKDIQAICGFSCDELTNMFVEMQGLRSMVTTLQ DRVRKVTEENELIAKVVQITPGVCIHNGILHKNKEEWTIDSCTECTCQNSATICRKVSCP LMPCSNATVPDGECCPRCWPSDYAEDGWSPWSEWTSCSVTCGNGVQQRGRSCDSLNNRCE GSSVQTRTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGTGMITRIRLCNSPVPQMNGKPC EGEARETKSCQKDPCPINGNWGPWSPWDVCTVTCGGGIQKRGRLCNDPEPQYGGKDCIGD ATGTQVCNKQDCPIDGCLSNPCFAGTTCTSSPDGSWKCGACPTGYHGNGVQCKDIDECQE VPDTCFVLNGVHRCENTEPGYNCLPCPPRFTGTQPFGRGIEDATANKQVCKPRNPCTDGT HDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHCK KDNCPNLPNSGQEDYDKDGIGDACDNDDDNDNIPDDRDNCAFIYNPQQYDYDRDDVGDRC DNCPYNHNPDQTDTDNNGEGDACAVDIDGDGILNERDNCQYVYNVDQRDTDLDGVGDQCD NCPMEHNPDQEDSDSDRIGDKCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDAC DHDDDNDGIPDDKDNCRLVANPDQTDSDGDGRGDACKDDFDQDNVPDIDDICPENVDISE TDFRRFQMVPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFFI NTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGPGE HLRNALWHTGNTAGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVIMYEGKKIMAD SGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP NT seq 3531 nt NT seq  +upstreamnt  +downstreamnt atggagctatcgggcggacttttcctcctcctaatgtttggtgtctgcggagcaaaccag atcccagagtctgggggcgatgataacagtgtgtttgatctcttcgaactcatcggcttc actcgcaagggggccggacgtcgggcaactggggtacacttggtgaagggacctgagccc tccagccctgcttaccgcattgaggatgccagccgcatcccagctgtgcctgatgacaag ttccaagatttgctggatgccatctatgctgagaagggcttcatcttgctggctaccctc cggcaggccaaaaagagccggggcaccctgctggccgtggagcgcaaggacagctctggc catatcttcaacctggtgtctaacggcaaggcaggcaccctagacctgagcctgtctggt gatggcaagcagcaggtggtgtcagtggaggatgccctgctggccactgggcactggaag aatatcaccctgttcgtacaggaggatcgggcccagctgtacgtagggtgtgagaaaatg gagaatgctgaactggacatccccatccaaaacatcttcaccagggacctggccagcagt gccaagctccgcatcgccaagggtggtgtcaatgataacttccagggagtgctgcagaat gtgcggtttgtctttggaacaaccctggaagccatcctaaggaacaaaggttgctccagc tccactagtgcgatcattacattggacaatcccatcaatggctccagtccagctatccgt actaattacattggccacaaaacaaaggatatccaggcaatctgtggcttctcctgtgat gaacttacaaatatgtttgtggaaatgcaaggattgcggtccatggttacaacacttcaa gacagagtgcgtaaagtgactgaagaaaatgaattgattgccaaagtagtgcagatcact cctggtgtgtgcattcataatggaattctgcacaaaaataaagaagagtggactattgac agctgcactgaatgtacttgccagaattctgccactatatgcaggaaagtgtcttgccct ctcatgccttgttctaatgccactgttcctgatggggagtgctgcccacgatgctggccc agtgactatgcagaagatggctggtccccttggtctgagtggacttcatgctctgtgacc tgtgggaatggggttcagcagagaggccgttcttgtgatagtctcaataatcgctgtgaa ggttcctctgtgcagactcgcacctgccacattcaggagtgtgataagaggttcaaacag gatggtggttggagccactggtcgccatggtcatcatgttctgttacctgtggcactggc atgatcactagaatccgtctttgcaactctccagtcccacagatgaatggcaaaccgtgt gagggtgaggcaagagaaaccaaatcatgccagaaagatccttgcccaataaatggaaac tggggaccctggtctccatgggatgtatgcacagtcacatgtggaggaggcattcaaaaa cgtggacgtctttgcaatgaccctgagcctcagtatggtgggaaggactgcataggtgat gccacagggacccaggtctgcaacaagcaggactgtccaattgatggatgcctatctaat ccctgctttgcgggaacgacatgtaccagctcccctgatggttcctggaagtgtggtgcc tgccctactggttaccatggcaatggtgttcaatgcaaagatattgatgagtgtcaagag gttcctgatacctgctttgtcctcaatggcgtgcacagatgtgagaacactgaacctgga tacaactgcttgccttgcccaccacgtttcactggaacacagccttttggtcggggtatt gaggatgccacagctaacaagcaggtctgcaaaccacgtaatccatgcacagatggaact catgattgcaacaagaatgccaagtgcaattaccttggccacttcagtgaccccatgtac cgctgtgaatgtaaaccaggctatgctggcaatggcataatctgtggagaagatactgat ttagatggatggccaaatgagaaccttgtctgtgttgccaatgccacttatcactgcaaa aaagataactgtcccaatcttcccaactctgggcaggaagactatgataaggatggaatt ggtgatgcatgcgataatgatgatgataatgataacattccagatgacagggacaactgt gcattcatttacaacccacagcagtatgactatgatagggatgacgttggtgaccgctgt gataactgcccctacaatcacaaccctgatcagactgacactgataacaatggagaagga gatgcatgtgctgtggatattgatggagatggcattcttaatgaaagggacaactgtcaa tatgtctacaacgtagaccagagggatacagatttggatggtgttggggatcagtgtgac aactgccctatggaacacaatccagaccaggaggattctgactctgaccgcataggtgat aaatgtgacaacaatcaggacatagatgaagatggccatcaaaataacctagataactgc ccctatgtgcccaatgctaatcaagctgaccacgacaaggatggcaaaggtgatgcctgt gaccatgatgatgacaatgatggtatccctgatgacaaagataactgcagactggttgcc aacccagaccagactgactctgatggtgatggacgtggagatgcttgcaaagatgacttt gaccaagacaatgtgccagacattgatgacatctgccctgagaatgttgacatcagtgag acagacttccgtcgatttcagatggttcccctggatcctaagggaacatcgcaaaatgat cctaactgggtggttcgtcaccagggtaaagagctggttcagactgtcaattgtgatcct ggacttgcagtgggatttgatgaattcaatgctgtggacttcagtggcacattcttcatc aatacagaaagggatgatgactatgctggctttgtatttggttatcagtctagcagccgt ttctacgtagtcatgtggaagcagatcacccagtcctattgggactcaacaccaaccaaa gctcagggatactcaggtctttctatcaaagttgtgaactctaccacaggtcctggagag caccttcgaaatgctctgtggcacacaggaaacaccgctgggcaggtgcggaccttgtgg catgatcctcgtcacataggctggaaagattttactgcctacagatggcgtcttagccac agaccaaagactggctacattagagttataatgtacgaagggaagaaaatcatggctgat tcaggaccaatctatgataaaacttatgctggtggtcggttaggattatttgtcttctct caagaaatggtgttcttctcagatcttaaatatgaatgcagagatccataa

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