Chelonia mydas (green sea turtle): 102943177
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Entry
102943177 CDS
T02989
Symbol
IARS1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
102943177 (IARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cmy01007
]
102943177 (IARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmy03016
]
102943177 (IARS1)
Enzymes [BR:
cmy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
102943177 (IARS1)
Amino acid related enzymes [BR:
cmy01007
]
Aminoacyl-tRNA synthetase
Class I (U)
102943177 (IARS1)
Transfer RNA biogenesis [BR:
cmy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
102943177 (IARS1)
Prokaryotic type
Other AARSs
102943177 (IARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Plectin_PPL
Motif
Other DBs
NCBI-GeneID:
102943177
NCBI-ProteinID:
XP_007055642
LinkDB
All DBs
Position
7:complement(40094630..40274921)
Genome browser
AA seq
1290 aa
AA seq
DB search
MLSFGCIISSRPVAGAVEGEATGERMVQQVAENINFPQEEEKILNLWNTLDCFQECLKQS
KNRPRFTFYDGPPFATGLPHYGHILAGTIKDVVTRFAHQSGFYVDRRFGWDCHGLPVEYE
IDKTLGIKGPEDVAKMGIAEYNNQCRGIVMRYSTEWRISVTRLGRWIDFDKDYKTLYPEF
METVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYKDVQDPSVIVSFPLDED
ENVSLVAWTTTPWTLPSNLALCVNPELQYVKVKDSATGKIYILMEARLVALYKSESDYVI
LDRFPGINLKGKKYKPLFEYFIKCKNNGAFTVVTDNYVKEEEGTGVVHQAPYFGADDYRV
CMDFNIIQKDSVPVCPVDASGCFTAEVIDFAGQYVKDADKNIIKALKEQGRLVHTSTFKH
NYPFCWRSDTPLIYKAVPSWFVRVEHMVEKLLENNGQCYWVPDFVREKRFGNWLKDARDW
AISRNRYWGTPIPLWVSNDFEEVVCIGSVAELEELSGVKITDLHRESIDHLTIPSRCGKG
MLHRVSEVFDCWFESGSMPYAQVHYPFENRKEFEDAFPADFIAEGIDQTRGWFYTLLVLS
TALFGKPPFKNVIVNGLVLASDGQKMSKRKKNYPDPVNIVNGYGADALRLYLINSPVVRA
ENLRFKEEGVRDVLKDVFLPWYNAYRFLIQNIVILQHKEDGKEFLYNENTMKESNNIMDK
WILSFTQSLIQFFKAEMAAYRLYTVVPRLVKFVDVLTNWYVRMNRRRLKGENGNEDCIMA
LETLFSVLYAMCRLMAPYTPFITEMMYQNLKTLIDPASVQEKNSDSIHYLMLPQVRDDLI
DKKIENAVSWMQSVIELGRVIRDRKTIPVKYPLKEVVVIHQDQEALENIRSLEKYILEEL
NVRQVTLSTDKDKYGIRLRAEPDHMVLGKRLKGAFKAVMTAIKELKSEQLEEFQMSGTIV
VEGHELHEEDLRLMYTFDQVMGGSAQYEAHSDAQVLVLLDVTPDQSMVDEGVAREVINRI
QKLRKKRNLVPTDEITVYYRSHPEGDYLDSVIKEHTDFIFATIKAALKPYPVPTSREVLI
QEKTQLKGSELEITLVRGGLHHRVDPACAYVNLNICINGKEQDGVLLLENPKGDNKLNYT
KLMDVVSCIFGLKDSELSVFNGKSELLSNTDLLTLSGKTLHVTSGSAPALINTHDTLLCQ
YINLQLVNAKPQECLKGVVGTLLMENPVGQNGLTYQGLLYETAKVFGLRSRRLKLFLDEA
QTQEITKDTSMKTLNTKTLYVHVIPTTAEC
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgctttcttttggttgcatcatttctagccggccggtggctggggccgtggagggcgag
gcgactggggaaagaatggttcagcaagttgcagaaaacataaattttcctcaggaggaa
gagaagatactgaatctctggaacacacttgattgttttcaggaatgcctgaaacagtca
aaaaacagaccaagatttactttttatgatggccctccatttgcaactgggcttccccac
tatggccacattcttgcaggaaccattaaagatgtagtaaccagatttgctcaccagagt
ggcttttatgtagacagaagatttggatgggattgtcatggtttacccgtggagtatgaa
attgacaaaacactaggaatcaaagggccagaggatgtggctaaaatgggtattgcagaa
tataacaatcagtgcagggggattgtgatgagatactctacagaatggaggattagcgtt
accagactaggacgatggattgactttgacaaggactataaaactctatatcctgagttc
atggagactgtctggtgggttttcaaacagctgtatgacaaaggactggtttacagaggc
gttaaggttatgcctttctcgacagcatgtaatactcccctttcgaattttgagtctcac
cagaactacaaggatgttcaagatccttcggtgattgtgagcttcccattggatgaagat
gaaaatgtctctcttgttgcttggacaactaccccctggaccctgcctagtaacttggcc
ctctgtgttaacccagaattgcaatatgtgaaagtaaaagatagtgccacagggaagatt
tatattttgatggaagccaggctggtagcactgtacaaatctgaaagtgattatgtgata
cttgacaggtttcctggcattaatcttaaaggcaagaaatataaaccactatttgaatat
tttattaagtgtaaaaacaatggtgcttttactgtggtcacagacaactatgtgaaggag
gaagaaggtacaggagttgtacatcaggctccttactttggtgctgatgactacagagtc
tgcatggattttaatattattcagaaagattctgttccagtttgtcctgttgatgcttca
ggctgcttcacagcagaagtgatagattttgctggacaatatgtgaaggatgcagataag
aacatcatcaaagctctgaaagaacaaggtagactggttcacaccagtactttcaagcac
aattatcctttctgctggaggtcagatacccctctaatttacaaagctgtaccaagctgg
tttgtaagagtagagcacatggtggagaagctgttggagaacaatggtcaatgctactgg
gttcctgactttgtgagagagaaacgttttggaaactggctgaaagatgcacgcgactgg
gctatttccaggaaccgatactggggaacacctatccctttgtgggtcagcaatgatttt
gaagaggtggtttgcattgggtcagtggcagagctggaagagctgtcaggagtgaaaatc
actgatctccacagagaaagtatcgatcatctaaccatcccttcacgctgtggaaaggga
atgttgcaccgtgtttctgaagtctttgattgttggtttgagagtgggagcatgccttat
gcacaagtccattatccatttgagaacagaaaagaatttgaagatgcctttcctgctgac
ttcattgctgaaggcattgaccaaaccagaggatggttttatactctcctggtgctatcc
acagctctttttgggaagccgcctttcaagaatgtaattgtaaatgggctggttcttgct
agtgatggccaaaaaatgagcaaacgcaagaagaactatcctgatccagtgaacattgta
aatggttatggagctgatgcgttaaggctgtacctcatcaattctcctgtggtaagagca
gaaaacttgcggtttaaggaggaaggagtaagagatgtgctgaaggatgtatttctgccc
tggtacaatgcatatcgctttctcattcaaaatattgtgatcctacaacataaggaagat
ggaaaggaattcctgtacaatgagaacacaatgaaggagagcaacaacatcatggataaa
tggattctttccttcacgcagtcactcattcagttcttcaaggctgaaatggcagcctac
agactatacactgtagtccctcgactagttaagtttgttgatgtactgaccaactggtac
gtcagaatgaatcgcagaaggttaaagggtgaaaatgggaatgaggactgcattatggcg
ttggaaaccttgttcagtgttctctatgctatgtgcagactcatggcaccttatactccc
tttatcactgaaatgatgtaccagaatctgaagacccttattgatccggcctcagttcag
gagaagaacagtgatagcattcactatctcatgcttcctcaagtgagggatgatctgatt
gacaaaaaaattgaaaatgccgtttcctggatgcaatctgttattgagcttggccgggta
attcgagacagaaaaaccattccagtaaagtatccactaaaagaagtagtggttatccat
caggaccaggaggctctggaaaacatcaggtctctggagaagtatatacttgaggaactt
aacgtacgtcaggtgacattgtctactgataaagataagtacggaatccgtctaagagca
gaaccggatcatatggtgctcgggaagcgtctgaaaggtgcctttaaagctgttatgact
gccatcaaggagctgaagagtgagcagctggaagaattccaaatgtcaggtaccattgtt
gtggaagggcatgaattacatgaggaggatctccgtctcatgtacacctttgaccaggtc
atgggaggatctgcccagtatgaggcacattctgatgctcaggttttagttctcctagat
gtcaccccagatcagtcaatggttgacgaaggagttgctcgcgaagtgattaatcgcatc
caaaaacttcgcaagaagcgcaatctagttcctacggatgagattactgtatattacaga
tcacatcctgaaggtgactacctggattctgttattaaggagcatacagatttcattttt
gcaacaataaaggctgccctgaagccataccctgtgcctacttcaagggaagtgcttatt
caagagaaaacccaactgaaggggtcagaactagaaatcacacttgtcagaggaggctta
catcatcgtgttgacccagcctgtgcttatgtcaatctcaacatttgtattaatggtaaa
gagcaagatggtgtgttgctgctggaaaatccaaaaggagataataaattaaactatacc
aaacttatggatgttgtgtcctgcatttttggccttaaagattcagagctgtcagttttc
aatggaaaatcagaactgttgagcaacactgacttactgactctcagtggaaagactctt
catgtgacatcagggtcagcccctgctttgatcaatacccatgataccctcctttgccag
tatatcaacttacagctagtgaatgcaaaaccacaagagtgtctgaaaggagtggtggga
actcttctaatggaaaacccagttggtcagaatggactaacatatcaaggtcttctctat
gaaacagcaaaagtgtttggactcaggagcaggaggctaaaattgttcctagatgaagca
caaacacaggagattacaaaggacacctccatgaagaccctgaatacgaagactctgtat
gttcatgttataccaacaacagctgaatgctga
DBGET
integrated database retrieval system
