Croceicoccus naphthovorans: AB433_13560
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Entry
AB433_13560 CDS
T03964
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
cna
Croceicoccus naphthovorans
Pathway
cna00300
Lysine biosynthesis
cna00550
Peptidoglycan biosynthesis
cna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cna00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AB433_13560
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AB433_13560
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cna01011
]
AB433_13560
Enzymes [BR:
cna01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
AB433_13560
Peptidoglycan biosynthesis and degradation proteins [BR:
cna01011
]
Precursor biosynthesis
Amino acid ligase
AB433_13560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
AKM10760
UniProt:
A0A0G3XGU9
LinkDB
All DBs
Position
complement(2704103..2705578)
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AA seq
491 aa
AA seq
DB search
MKLSNLAQKAGLSINGDADVTGFAIDNRKVAPGTVFGAFEGATVNGEDFIPAAVQAGAVA
VVARPEASVEGAIHIAEANPRRAFARLAAGFFKPVPATIVAVTGTNGKTSTVEMTRQIWR
MCGRSAASIGTLGVTTPDESVSTGLTTPDIVTFLSNMTGLAREGVSHVAYEASSHGLSQF
RNEGLPVAAGAFTNLSRDHLDYHADMDEYFAAKMRLFDEVVSEGGTAVIWTDDPRSDAVR
NHAAARGLRVFAVGEQADAAEAGIRLLNRTPTELGQDLLLGHDGAEYKVQLPLIGAYQAA
NALVAAGLVLATADKDGPDAKAVFDAMARLQPVRGRLERAAINRAGAPVYVDYAHTPDAL
EAAIFALRPHVSGRLITVFGAGGDRDTGKRAPMGDIAAAHSDVAIVTDDNPRGEDPASIR
AAILAGAEGADNITEVDGRRAAIAAAIKQAGKGDIVLIAGKGHEQGQIYGRAEAMRVHPF
DDVTVARECAA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaaactttccaaccttgcgcagaaggctggactttccatcaacggagacgctgacgtc
acgggctttgccatcgacaaccgcaaggttgcgcccggcaccgttttcggcgcattcgaa
ggcgcgaccgttaatggcgaggattttattcccgccgccgttcaggccggagcagtcgcg
gtcgtcgctcgccccgaagccagcgtcgaaggcgcgatccacatcgccgaagccaacccg
cgccgcgcttttgcgcgccttgccgccgggttcttcaagccggttccggccactatcgtc
gcggttacgggcaccaacggcaaaaccagcacggtcgagatgactcgccagatctggcgc
atgtgcgggcgctctgccgcgtcgatcggtacactgggcgttactactccggacgaaagc
gtttcgaccggattgaccacgccggacatcgtcaccttcctgtcgaacatgaccggcctt
gcccgcgaaggggtgagccacgtcgcctacgaggcgtcgagccacgggctgtcgcagttc
cggaatgaaggtctgccggtcgctgccggggctttcacgaacctcagccgcgatcacctc
gattaccacgcggacatggacgagtatttcgccgcgaagatgcggctgttcgacgaggtt
gtctcggaaggcggcacggcggtgatctggaccgacgatccgcgcagcgatgcggtacgg
aaccatgcggcggcacgcggattgcgcgtctttgccgtgggagagcaggcggatgcagcg
gaggccggcatccgcctgctcaaccgtacgccgaccgaactgggtcaggacctgctgctc
ggccacgatggcgcggaatacaaggtgcagctgccgctgatcggggcctatcaggccgca
aatgcgctggtcgcggcgggcctcgtgctggcaaccgccgacaaggacggaccggatgcg
aaggcagtgttcgacgcgatggcgcgattgcagccggtgcgcggccggctggaacgggcc
gcgatcaaccgcgcgggcgcgccggtctatgtcgattatgcgcatacgcccgacgctctg
gaggcggcgatcttcgcgctgcgtccgcatgtatcgggccgtctgatcacggtgttcggg
gcgggcggcgaccgcgataccggcaaacgcgcgccgatgggcgacattgccgcagcgcat
tcggacgtggccatcgttaccgacgacaacccgcgcggcgaagatcccgcatcgatccgc
gccgcaatcttggcgggcgcggaaggcgcggacaacattacagaggtcgacggacggcgc
gccgcgattgccgccgcgatcaaacaggccgggaagggcgacatcgtcttgatcgccggc
aagggccacgaacaaggccagatttatggacgcgcggaggccatgcgcgtccacccattc
gatgacgttaccgtagccagggagtgcgcagcatga
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