Caldicellulosiruptor naganoensis: OTJ99_001249
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Entry
OTJ99_001249 CDS
T08720
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cnag
Caldicellulosiruptor naganoensis
Pathway
cnag03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cnag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OTJ99_001249 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnag03400
]
OTJ99_001249 (nth)
Enzymes [BR:
cnag01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
OTJ99_001249 (nth)
DNA repair and recombination proteins [BR:
cnag03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OTJ99_001249 (nth)
Prokaryotic type
OTJ99_001249 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Ogg-HhH
EndIII_4Fe-2S
HHH_5
HHH_8
DUF4294
RecR_HhH
Hydantoinase_A
Zn_clus
Motif
Other DBs
NCBI-ProteinID:
WAM32698
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All DBs
Position
1272065..1272694
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AA seq
209 aa
AA seq
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MYVIEKLLELYPEPKCTLEYNKPYELLIATILAAQSTDERVNKITPTLFKKYPSLEHFAN
ADLKELEKDIKSVGFYRNKAKSIKEIAKLLIEKYNGMLPNNIEELTTLKGVGRKTANVIM
ANIFGVPSIIVDTHCMRLSNRIGFVNSEDPDKIEFELRKIIPQDMYTIFSNLMVYHGRAV
CKARKPNCSQCIINNVCDFYKRLSKNNNF
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atatacgtaatagaaaaacttttagagctctacccagagccaaagtgtaccttagaatat
aataaaccatacgagcttttaatagcaacaattttagcagcacaaagcacggacgagcgt
gtaaataaaataactccaacactttttaaaaaatacccttcacttgagcattttgcaaat
gctgatttaaaagagttagaaaaagatataaaatctgttgggttttatagaaacaaagca
aaaagtataaaagaaatagcaaaacttcttattgagaagtacaatggcatgttgccaaac
aatatcgaagagctaacaacactaaaaggtgttggtagaaaaactgcaaatgttatcatg
gcaaacatctttggagtaccttctataattgttgatacacattgtatgagactttcaaac
agaattggttttgtaaatagcgaagaccctgataaaatagagtttgaattaagaaaaata
attcctcaggatatgtacactatatttagtaatctcatggtttatcatggaagagctgta
tgcaaagcaagaaaaccaaactgtagtcagtgcattatcaataatgtatgtgacttttac
aagaggctgtccaaaaacaataatttttaa
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