Cupriavidus nantongensis: A2G96_13985
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Entry
A2G96_13985 CDS
T09823
Symbol
ligA
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cnan
Cupriavidus nantongensis
Pathway
cnan03030
DNA replication
cnan03410
Base excision repair
cnan03420
Nucleotide excision repair
cnan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cnan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A2G96_13985 (ligA)
03410 Base excision repair
A2G96_13985 (ligA)
03420 Nucleotide excision repair
A2G96_13985 (ligA)
03430 Mismatch repair
A2G96_13985 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cnan03032
]
A2G96_13985 (ligA)
03400 DNA repair and recombination proteins [BR:
cnan03400
]
A2G96_13985 (ligA)
Enzymes [BR:
cnan01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
A2G96_13985 (ligA)
DNA replication proteins [BR:
cnan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
A2G96_13985 (ligA)
DNA repair and recombination proteins [BR:
cnan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
A2G96_13985 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A2G96_13985 (ligA)
MMR (mismatch excision repair)
DNA ligase
A2G96_13985 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A2G96_13985 (ligA)
BRITE hierarchy
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
AMR78767
UniProt:
A0A142JL05
LinkDB
All DBs
Position
1:complement(3033478..3035607)
Genome browser
AA seq
709 aa
AA seq
DB search
MTAKHRGAQADASAPAGALPADAAASRVAWLREELDRHNYQYYVLDAPTVPDAEYDALFS
ELMALELEHPELQTPDSPTQRVGGEPLAAFDSVRHRVPMLSLNNAFADDDVLNFDRRCAQ
GLGRSAPAAGEADLFSAADAVEYACELKFDGLAMSLRYEDGRLVQAATRGDGETGEDVTV
NVRTIKAIPLKLRGQAPAVLEVRGEVFMFRRDFDKLNARQAEAGEKTFVNPRNAAAGSLR
QLDPRITARRPLSFFAYGLGELQGVERPPTHSAMLDGFAALGLPVCKDRAVVKGAQGLLD
FYRDIGKRRDELPYDIDGVVYKVNALAEQERLGFVSRAPRFALAHKFPAQEMTTIVEDIE
VQVGRTGAITPVARLRPVFVGGVTVTNATLHNEDEIRRKDVHIGDTVIVRRAGDVIPEVV
AVVTERRPADARAFVMPTACPVCGSHIEKLEDEAIARCTGGLICAAQRKQSLLHFAQRRA
MDIEGLGDKLVEQLVDQGIVRTPADLYKLGVAKLAALERMADKSAANLVAAIDKSRATTM
NRFIFALGIRHVGEATAKDLARHFGKLDALMAADEAALLEVNDVGPVVAQSIANFLAEPH
NVEVIEQLRAAGVHWPESEPVAKAPAPLSGKTFVLTGTLPTLSREDAKELLETAGAKVAG
SVSKKTDYVVAGAEAGSKLDKAEALGVPVLDEAGMLALLAQAGAAPAEQ
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaaaacaccgcggcgcgcaggcagatgcctccgcgcccgccggcgccttgccg
gccgatgccgccgccagccgcgtggcctggctgcgcgaagagctggaccgccacaactac
cagtattacgtgctggacgcgcccaccgttccggatgcggaatacgacgcgctgttcagc
gagctgatggcgctggagctagagcatcccgagctgcagacgccggactcgcccacccag
cgcgtgggcggcgagccgctggcggcgttcgactcggtgcggcaccgcgtaccgatgctg
tcgctcaacaacgccttcgccgacgacgacgtgctcaacttcgaccgccgctgcgcgcag
gggctgggccgcagcgcgcccgcggcgggcgaggccgacctgttcagcgccgccgacgcg
gtcgaatacgcgtgcgagctgaagttcgacggcctggccatgtcgctgcgctatgaagac
ggccgcctggtgcaggccgcgacccgcggcgacggcgagaccggcgaggacgtcaccgtc
aacgtgcgcaccatcaaggcgatcccgctcaagctgcgcggccaggcgcccgcggtgctg
gaggtgcgcggcgaggtcttcatgttccgccgcgacttcgacaagctcaacgcgcgccag
gccgaggccggcgagaagaccttcgtcaacccgcgcaatgccgccgccggcagcctgcgc
cagctcgatccgcgcatcaccgcgcggcgtccgctgtcgttcttcgcctacgggctgggc
gagctgcaaggcgtggagcggccgccgacccacagcgccatgctcgacggctttgccgcg
ctgggtttgccggtgtgcaaagaccgtgcggtggtgaagggcgcgcaggggctgctcgat
ttctaccgcgatatcggcaagcgccgcgacgagctgccctacgacatcgatggcgtggtc
tacaaggtcaacgcgctggccgagcaggagcgcctgggctttgtctcgcgcgcgccgcgc
tttgcgctggcgcacaagttcccggcgcaggaaatgaccaccatcgtcgaggacatcgag
gtgcaggtcggccgcaccggcgcgatcacgccggtggcgcggctcaggccggtgttcgtc
ggcggcgtgaccgtgaccaatgccacgctgcacaacgaggacgagatccgccgcaaggac
gtgcatatcggcgacaccgtgatcgtgcgccgcgccggcgacgtgattccggaagtcgtc
gccgtggtgaccgagcggcgcccggccgatgcccgtgccttcgtgatgcccaccgcctgc
ccggtgtgcggctcgcatatcgagaagctcgaggacgaggccattgcccgctgcaccggc
ggcctgatctgcgcggcgcagcgcaagcagtcgctgctgcatttcgcgcagcgccgcgcc
atggatatcgaaggcctgggcgacaagctggtcgagcagctggtcgaccagggcatcgtg
cgcacgccggccgacctgtacaagctcggcgtggccaagctggcggcgctcgagcgcatg
gcggacaagtcggccgccaacctggtcgcggcgatcgacaagtcgcgcgcgaccaccatg
aaccgctttatcttcgcgctcggcatccgccacgtcggcgaagccaccgccaaggacctg
gcccggcacttcggcaagctcgacgcactgatggcggccgacgaggccgcgctgctcgag
gtcaacgatgtcggcccggtggtggcgcagtcgatcgccaacttcctcgccgagccgcac
aacgtcgaggtcatcgagcaactgcgcgccgccggcgtacactggccggaaagcgagccg
gtggcaaaggcgccggcgccgctgtcgggcaagacctttgtgctgaccggcacgctgccg
acgctgtcgcgcgaagacgccaaggaactgctggaaaccgccggcgccaaggtggccggg
tcggtgtcgaagaagaccgactacgtggtcgccggcgccgaggccggcagcaagctggac
aaggccgaggcgctgggcgtgccggtgctggacgaggccggcatgctggcgctgctggcg
caagccggtgccgcgccggccgagcaataa
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