Cryptococcus deneoformans B-3501A: CNBD4190
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Entry
CNBD4190 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
cnb
Cryptococcus deneoformans B-3501A
Pathway
cnb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CNBD4190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cnb03041
]
CNBD4190
Spliceosome [BR:
cnb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
CNBD4190
Complex C
U5 SnRNP specific factors
CNBD4190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
MMR_HSR1
EFG_III
EFL1
Septin
SRPRB
Ras
EF-G_D2
Roc
Motif
Other DBs
NCBI-GeneID:
4935808
NCBI-ProteinID:
XP_775690
LinkDB
All DBs
Position
4:<1204701..>1208171
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AA seq
994 aa
AA seq
DB search
MSTEDYDEFGNYIGGDLDSDDESDVSISPAAPPPAAPGPSAGPSASYAPLEGFDEDEAME
DEEPGMAMQLHGVDGSTGQQVVLHEDKKYYATAEETYGPDVEALVQEEDLQPLSEPIVQP
IKQKSFTVQEKGLPETRFDRNFMIDLMDHPSMIRNVMVAGHIHHGKTSLLDMLVFETHKM
TWDADQQTRYTDTHILSRARGISVKSGPMSLVLQNSKGKSNLINIIDTPGHANFVDEVAS
IARLTDGVVIVVDVVEGVMHGTEQVIRHAMQEKLKMVLVVNKMDRLILELRLPPSEAFFK
IKHTIEEVNSIIASIDPDDSFRHSPERGNVAFSSTQMGWCFTLKTFANMYADTFGSFDID
EFSLRLWGNIYFDSSTRKFTRKPADVESKRSFVHFILEPLYKLYTQVLSADQETLKETLA
DLQITLKPSVYKMDVRPLLKVVLEAFFGPSVGLIDMITEFLPSPQGGAEAKIRHTYTGPL
TSNLADSMISCDPQGPTVVHVTKLYHTADAEHFRAFGRVMSGTVKVGQVVKVLGEGYSLE
DEEDMISAIVDGIMIDESRYNVDIERAPAGNLVLLSGVDASISKTATIVSKDVDDDLYIF
RPIKHMTASVLKVAVEPVAPSNLPKMLDGLRKVNKSYPLVTTKVEESGEHIILGTGELYM
DSVLHDLRKLFSEIEIKVSDPVTKFCETVVETSALKCYAETPNKKNKLTMISEPLEAGIA
ADIEAGRVSMKMTNKERGKFFESNYQWDLLASRNIWAFGPDENGPNALINDTLPSEVDSK
LLSSVKESVKQGFQWGTREGPLCDEPIRGVKFRILDASLAQEPIYRGGGQIIPTARRVCY
SSFLLATPRLLEPVYYVEVQAPADCVAAVYTVLSRRRGHVTKDIPKPGSPLYTVKAFIPV
LDANGFETDLRTATLGQAFCQMSFDHWSVVPGDPTDSSIQLRPLEPAMGQSLARDLVLKT
RRRKGLSDSIAVSKYLEDETIIAISASGNADLLG
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgtccacagaagattacgacgagtttggtaactatatcggaggtgatctcgactccgac
gatgagtccgacgtctccatttcccctgctgctcctccgcctgcggctcctggaccttca
gctgggccgtcagcgagctatgctcctcttgaaggtttcgatgaagacgaggcaatggaa
gatgaggaacccggcatggccatgcagctccacggcgtcgatggttcaacaggccaacaa
gtagtcctgcacgaggataaaaagtactacgccactgctgaggagacctacggtccggat
gttgaggcgttggtacaggaagaggatctgcaacctctttctgaacccattgtgcagccg
atcaaacaaaagtcatttaccgtacaggaaaagggattgcctgaaactcggtttgaccga
aactttatgattgatttgatggatcacccttcaatgatccgaaatgtcatggttgccgga
catatccatcatggaaaaacttcattgttagatatgctggtgtttgagacccacaaaatg
acttgggatgccgaccaacagactcgatatactgatacgcacatactctcgcgtgctcgc
ggtatttccgttaaatctggccctatgtctcttgttcttcaaaactctaaaggaaagtca
aatctcatcaatattatcgacactccaggtcacgccaacttcgttgacgaggtcgcctca
attgcccggcttaccgatggtgtggtcattgtggtggatgtggttgaaggtgtgatgcac
ggcaccgagcaagtgatccgtcacgcaatgcaggagaagttaaaaatggtgttggttgta
aacaagatggatagattgatcttggagttgcgtttaccgcctagcgaagctttcttcaaa
ataaagcacaccattgaagaagtcaactctatcattgcgtcaatcgatcctgatgactcc
ttccgtcattctcctgaaagaggcaacgtagcgttttcgtcaacgcagatgggttggtgt
tttaccctcaaaacattcgccaacatgtatgcggacacttttggctctttcgatatcgat
gagttttctctccgattatggggcaacatctactttgactcttccacccgaaagttcact
cgcaagcctgccgacgtcgagagcaagcgttcattcgtacactttattttggagcctttg
tacaaactctatactcaagtattgagtgcagaccaggaaacactgaaagaaacattggcc
gatttgcagatcacactcaaaccttcagtatacaagatggatgtcagacccctgttgaag
gtcgtgttggaggcattttttggcccatcagttggattgatagacatgatcacagaattt
ctaccttctcctcaaggaggcgctgaagcgaaaatacggcacacgtacaccggacctctc
acttctaaccttgccgattctatgatcagctgtgacccccaaggacccactgttgtacat
gtgaccaagctctaccatactgccgatgccgaacatttccgtgcttttggacgtgtcatg
agtggaactgtcaaagttggtcaagttgtcaaggtgctgggagaaggttactctttagaa
gacgaagaagatatgatcagtgccattgtggatggtattatgattgatgagtccagatat
aacgtggatattgaacgtgctcccgctggaaatcttgtcctcctatctggcgttgatgcg
tccatttccaagactgctacaatcgtctcaaaagatgttgatgacgatctctatatcttc
cgtcccataaagcacatgacagcttcagttctcaaggttgctgttgaacctgttgccccg
tccaacctaccaaaaatgcttgatggtctgcgaaaggtcaacaagtcataccctcttgtc
actaccaaggttgaggagagtggagagcacatcatcctcggtacaggagagctatacatg
gactctgtcttacatgatttaagaaagttattctcagaaatagagatcaaggtctcagat
cctgtcaccaagttctgtgaaacagtagtggaaacttctgctttgaaatgctacgccgaa
acgcccaacaagaagaataaactgaccatgatctccgaaccgctcgaggccgggattgcc
gccgacattgaggctggcagagtcagcatgaagatgaccaataaagaaagagggaagttc
tttgagagcaattaccaatgggatctgctggcttccaggaacatctgggcctttgggccg
gacgaaaatgggccgaacgcgttgattaatgacaccctgccctccgaggtggacagtaag
ctcttatcgagcgtcaaggaaagcgtgaagcagggcttccagtggggtacccgtgaagga
cctctatgtgacgaacccattcgcggtgtcaaattccgcattcttgatgcctctctcgca
caagaacctatctaccgagggggcggccaaattatcccaaccgctcgacgagtttgttac
tcctccttcctcctggccacccctcgtcttctcgaacctgtatactatgttgaggttcag
gctcctgccgattgcgtcgccgctgtgtacacagtcctctctcgccgacgtggccatgtc
actaaagacattcctaaacctggttctccgctctacaccgtcaaggcattcattcctgtg
ctcgacgcaaacggatttgaaactgatttgaggaccgcaacattgggtcaggcattctgt
caaatgagctttgaccactggagtgttgtgcctggagatcccactgacagcagcatacag
ctaagacctttggaaccggcgatgggacagagtttagctagggatttggtcctgaagacc
aggcgaaggaagggtttgagtgacagtatcgctgtgagcaaatacttggaagatgagacg
atcattgctatcagcgcatctggtaatgcagatttgttgggttag
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