Cryptococcus deneoformans B-3501A: CNBE4760
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Entry
CNBE4760 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
cnb
Cryptococcus deneoformans B-3501A
Pathway
cnb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNBE4760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnb03019
]
CNBE4760
Messenger RNA biogenesis [BR:
cnb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CNBE4760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_25
RsgA_GTPase
Arf
nSTAND3
PduV-EutP
AAA_28
NACHT
AAA_23
CLP1_P
MMR_HSR1
AAA
ORC-CDC6-like
SRP54
AAA_15
Motif
Other DBs
NCBI-GeneID:
4936488
NCBI-ProteinID:
XP_775203
LinkDB
All DBs
Position
5:complement(1286572..1287651)
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AA seq
268 aa
AA seq
DB search
MPAADQLAIDCQSLTYSWKEGDDPVLENVNLELRKGDRCLLLGANGAGKSTLLRILAGKR
LTKTRTCRILGQDVFMSPPGGVVYLGTEWSSNPVVRSDIVVSHFLDSVGGYRHKERRDRL
LRILDVDLDWHMHQISDGERRRVQLCMGLMGEWDVLLLDEVTVDLDVLVRADLIDFLISE
SETRGATIVYATHIFDGLKKFPTKICHIQLGSTPRGLIAWPPADKGLQEETLFELALGWL
REDRDLRRQKENEKGRTRGPKTDVSVTR
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgccagcggcggatcaactggccatcgactgtcaaagtctcacctattcatggaaagaa
ggagacgatccagtcctcgaaaatgtgaacctcgagcttcgaaagggggataggtgtctg
ctattgggtgctaacggagcgggaaaatcgacacttttaaggattttagcaggcaagaga
ttgaccaagacgaggacttgtcggatcttggggcaggacgtattcatgagccctccaggt
ggtgttgtctatctcggaacagaatggtcctccaaccccgttgttcgctcggacattgtt
gtttctcatttcttagactctgtggggggttacaggcacaaggagaggagagataggctt
ttgaggatcctcgatgtcgatcttgactggcatatgcaccaaatctctgatggagagcgt
cgtcgggtccagctttgtatgggacttatgggagaatgggatgtcttgcttctggatgaa
gtcactgttgatctggatgtgctcgttcgtgcagacttgattgattttctgatttctgaa
tccgaaacaagaggggctactattgtctatgccacccacatctttgatggcctcaaaaaa
ttccctacaaaaatttgtcacatccagctaggctcaactcctcgtggcctcatcgcttgg
cctcctgccgacaaagggttgcaagaggaaacgcttttcgagttggcattaggctggttg
agggaggatagagatctgagaaggcagaaagaaaatgagaagggaaggacgagagggccc
aagacggatgtaagtgttactcgctaa
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integrated database retrieval system
