Cryptococcus deneoformans JEC21: CNA03070
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Entry
CNA03070 CDS
T00243
Name
(RefSeq) hypothetical protein
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
cne
Cryptococcus deneoformans JEC21
Pathway
cne03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CNA03070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cne03019
]
CNA03070
03032 DNA replication proteins [BR:
cne03032
]
CNA03070
Messenger RNA biogenesis [BR:
cne03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
CNA03070
mRNA cycle factors
Common to processing body (P body) and stress granule
CNA03070
DNA replication proteins [BR:
cne03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
CNA03070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN_4
EST1_DNA_bind
PIN_9
Motif
Other DBs
NCBI-GeneID:
3253409
NCBI-ProteinID:
XP_024514143
UniProt:
A0A0S2LI56
LinkDB
All DBs
Position
1:complement(join(805236..805654,805708..807161,807211..807828,807879..808085,808134..808640,808690..808956,809015..809175))
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AA seq
1210 aa
AA seq
DB search
MGEIPLAGPSRPRRRNNTESDGISIRVAALQKQNATLVGVAANESGKTRPPPASPSRSRP
HSSLPSRPDIDDDYYRGISGPMPSSLTSNLEFNDADGLGVAGSSRPRRKDYAAVNGASSR
AATLPKHGAAVKDEGETQQLPTSPSRPHSRPHPSLPTRPRRDNEFSRGASGSSTNKVLFD
PTKLHEVRRVEPGSTKKLFDPVAHDPRSFTSLATPPSLPDTESAPSTSTTAKRLLRRAAP
GTGSGSGQSGSSKHTWEIDADRERERRRRREGSERGSTLSGKKKDSDARSKGSKSSEGSE
SFKDRERGKGKNDTGVKPILKKIHDEIKELEQELIEIHRKMAQDPEAGISALSSRKMDSR
TPKSPSDDAVAWVQLISKHKQLADLHDHFLTTLFDPLVPSSYHQLSIKYNIPSRLWQTAF
FLILEQLRHAWVSHHPSALDLLTDVVYDAYRFYSELLENQALSGLRGAWIEALGDLARYR
MTIASHVADIDPRKETERIRDQRQGADDDNDQDPEGKPPLSGASIGAEVAQNWDVEDKET
WRVTARDWYTMGITEKPGEGRLHHHLALLCRDMKGQEGRALHHFVKSLVVTHEFSTSRET
ILPLFDTALQSQRSLPEATAMDLFIRLHGMLFTRISLDSFPDVMSRYVERLEEDARLDGV
SRKATISQVDWMIMGVVNIAGVLQYGSASGIIRKALAQEGAERRKAQAQNADDEEGEDVG
ENLEEVNGISKDTELVSLPASVAESDLPITFTHALFLTFAVFGFSLAHPNRIQGFHQVLN
PYIIIVLTFLATLFRQPHVGVHLLPYVPWQLLADFINSANLSLVEEKRLANGAPLPEDWL
IRGSEWVGRRVYERGFWKGKSPSGRGSSGLLQAQPRSGERFQSEMDVLLSNFDASVDIQE
GVVDEAEGTDLTDGPAAVNQRRWKRVAWAVGVLAKSVEGFEIRDGKVYVEGTLQEKVKER
ERRKEEEERREREVLERKRQEREKEEKLLGLEMGEESDDQELVDLRRKLQDLKAQAGVQV
SRKSRKAASNILDVVAGYTMLIFDTNILLDSLELVNRIVESGQWSVVVPLPVVTELDGLS
KEHGALGAAARAAVALLEERIRTHALCLKIQTTKGNYLSDLLIRTEQIDSSTYASSEAIA
RTMDDRIVHIASFAQEHFVDRTILLAMPRPEKGATKVLLISNDRNLRLKAKARGVEVANE
KELGVVLARV
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaaattcctcttgccggaccatcaagacctcggcggaggaataatacggaatcc
gacggcatatcgatcagagtcgcagctttacaaaaacaaaatgctactctcgtcggtgtt
gctgccaatgaaagcgggaaaactaggccacccccagcatctccttcaagatcgcgtccg
cattcatcattgccgtctcgacctgatatcgatgatgattattatcgaggtatttctggc
ccaatgccatcaagcttgacttcaaacttggaattcaacgatgccgatggactgggtgtc
gctggatcttccagaccccggcggaaagattatgcagccgtgaatggtgcgtctagcaga
gccgcaactttgccaaagcatggtgccgctgtcaaggacgaaggcgaaacgcaacagctt
ccaacgtccccctcaagaccccactcaagaccccacccatccttacccacccgtcccaga
agagacaatgaattctctcgtggtgcttccggatcatctacgaacaaggtactatttgac
cccacaaaactacatgaagtacggagagtggaaccgggcagtacaaagaaattattcgac
cccgtagcacatgatccgcgttcattcacttctcttgcaactcctccgtcattaccagac
acagagtctgcgccatcgaccagcaccacagctaaacggctattacgtcgtgctgctcct
ggcactggaagtggctccgggcaaagtgggagtagcaagcatacctgggagatcgacgct
gatagagaacgagaaaggagacgccgtagagaagggagtgaaaggggcagcacattatcg
gggaaaaagaaggacagtgatgcaagaagcaaaggatcgaagagcagtgaagggagtgag
agcttcaaagatagggaaaggggcaagggcaaaaatgacactggcgtcaagccaatcttg
aagaaaatacatgatgaaatcaaagagttggagcaggagcttatagaaatacatcgtaaa
atggctcaagatccggaagctggaatttctgctctttccagccgcaagatggactccaga
accccgaaatcaccgtccgacgatgctgtggcttgggtacagctcatatctaaacacaag
caacttgcagatctccatgaccattttttaacaactctttttgatccgctcgtcccttca
tcctatcatcaactttcaattaaatataacattccctcgcgtctgtggcagactgcattc
ttcctcattcttgagcaacttcgacacgcatgggtatctcaccacccttccgctttggac
ctgctgaccgatgtggtgtacgatgcttaccggttttactcggagctattggagaatcaa
gcattatcaggactgagaggggcgtggatcgaagcgctgggcgacctcgctcgatatagg
atgactattgcttctcacgtcgctgacatcgacccacgcaaagagacagagcgtattcgg
gatcaaaggcagggcgccgacgatgacaacgaccaggatccagaagggaaaccaccatta
tcaggagcaagcatcggagcagaagttgcacagaattgggatgttgaagataaagagacc
tggagagtaactgcgagggactggtacacgatggggataaccgagaaacctggagaaggc
aggttgcaccatcatctggctttactgtgtagggacatgaagggtcaggaaggaagggcg
ctccatcattttgtaaagagcttggtcgtcacccacgagttctctacttcccgcgagact
attcttccgctattcgacacggctctccaatctcagcgttccctccctgaagctacagca
atggaccttttcatccgcttacacggcatgctctttaccaggatctcgcttgattccttt
cccgatgtcatgtctcgttatgtcgagcgtcttgaagaagacgcaaggcttgatggtgtc
agtcggaaggccacaatcagccaggtggactggatgatcatgggagtagtgaatattgca
ggggttttgcaatacggttcagcgtctggtattatcagaaaggcattggctcaagaaggg
gctgaaagaagaaaggctcaagctcagaacgcggacgatgaggaaggggaagatgtagga
gaaaaccttgaagaagtcaacggtatttctaaagatactgaactcgtttctctgccagct
tccgtggctgagagtgatttgcccatcacattcacccacgctctattcttgacctttgca
gtttttgggttcagccttgcacatccgaatcgtattcaaggcttccaccaagtcctcaac
ccttacatcatcattgtcctgacttttcttgctacgctgttccgtcaacctcatgtcggt
gtccatctcttgccttacgtcccatggcaactcctagcagatttcatcaattccgccaat
ctctcgcttgtagaggaaaaacgactggcaaacggtgctccgctacctgaagactggctt
ataaggggtagtgagtgggtcggccgacgagtatatgagcgtggattttggaaaggaaaa
tctccttctggtcgaggatccagtggtctgctccaagctcagccgcgttccggcgaacgc
ttccaatcggagatggacgtccttttatccaactttgacgcgtcagttgacatccaggaa
ggtgtcgtagacgaagcggaaggaaccgacttgacggatggaccagcggcagtaaaccaa
aggagatggaagagagttgcctgggcggtgggagttttggccaagtctgttgaaggattc
gaaatcagggatggcaaggtgtatgtggaaggtacattgcaagaaaaggtgaaggaaaga
gagagaaggaaagaagaagaagaaagaagggaaagggaagtgctggaaagaaaaagacag
gaaagagaaaaagaagaaaaattgctaggactggagatgggcgaagagagtgatgaccag
gaattggtcgaccttcgaaggaaactgcaagatcttaaagcccaagcgggcgtgcaagtg
tcaaggaaaagcagaaaggcggcctcgaacatcttggatgtcgtggcaggatatactatg
ttaatatttgatacaaacatactgctcgactctttggagttggtcaacagaattgttgaa
agcggtcagtggagcgtggtggttcctcttccagtggtaaccgagctggatggcttgtcc
aaagaacatggcgccttgggcgctgcagctcgtgcggccgttgctttgctggaagaacgc
atacgtacacacgccctttgcctcaagattcaaaccactaaaggcaactatctctcggac
ttgctcatccgaacggaacaaattgactcctccacctatgcgtcttcagaggcaatcgcg
cgcactatggacgacagaatcgtccacattgcgtcctttgcgcaagaacatttcgtggat
cggacgatcttacttgcgatgccgaggccggagaaaggtgcgacgaaggtattgttgatc
agtaacgacaggaatctcaggctgaaggccaaggcgaggggtgttgaagttgcgaatgag
aaagagttgggtgttgtccttgcaagagtctag
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