| Entry |
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| Name |
(RefSeq) 116 kda U5 small nuclear ribonucleoprotein component, putative
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| KO |
| K12852 | 116 kDa U5 small nuclear ribonucleoprotein component |
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| Organism |
cne Cryptococcus deneoformans JEC21
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cne00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CND02170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:cne03041]
CND02170
Spliceosome [BR:cne03041]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
CND02170
Complex C
U5 SnRNP specific factors
CND02170
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
4:complement(join(581579..581626,581676..582284,582337..582550,582596..583033,583084..583346,583395..583589,583640..583919,583969..584345,584395..584533,584579..584978,585028..585049))
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| AA seq |
994 aa
MSTEDYDEFGNYIGGDLDSDDESDVSISPAAPPPAAPGPSAGPSASYAPLEGFDEDEAME
DEEPGMAMQLHGVDGSTGQQVVLHEDKKYYATAEETYGPDVEALVQEEDLQPLSEPIVQP
IKQKSFTVQEKGLPETRFDRNFMIDLMDHPSMIRNVMVAGHIHHGKTSLLDMLVFETHKM
TWDADQQTRYTDTHILSRARGISVKSGPMSLVLQNSKGKSNLINIIDTPGHANFVDEVAS
IARLTDGVVIVVDVVEGVMHGTEQVIRHAMQEKLKMVLVVNKMDRLILELRLPPSEAFFK
IKHTIEEVNSIIASIDPDDSFRHSPERGNVAFSSTQMGWCFTLKTFANMYADTFGSFDID
EFSLRLWGNIYFDSSTRKFTRKPADVESKRSFVHFILEPLYKLYTQVLSADQETLKETLA
DLQITLKPSVYKMDVRPLLKVVLEAFFGPSVGLIDMITEFLPSPQGGAEAKIRHTYTGPL
TSNLADSMISCDPQGPTVVHVTKLYHTADAEHFRAFGRVMSGTVKVGQVVKVLGEGYSLE
DEEDMISAIVDGIMIDESRYNVDIERAPAGNLVLLSGVDASISKTATIVSKDVDDDLYIF
RPIKHMTASVLKVAVEPVAPSNLPKMLDGLRKVNKSYPLVTTKVEESGEHIILGTGELYM
DSVLHDLRKLFSEIEIKVSDPVTKFCETVVETSALKCYAETPNKKNKLTMISEPLEAGIA
ADIEAGRVSMKMTNKERGKFFESNYQWDLLASRNIWAFGPDENGPNALINDTLPSEVDSK
LLSSVKESVKQGFQWGTREGPLCDEPIRGVKFRILDASLAQEPIYRGGGQIIPTARRVCY
SSFLLATPRLLEPVYYVEVQAPADCVAAVYTVLSRRRGHVTKDIPKPGSPLYTVKAFIPV
LDANGFETDLRTATLGQAFCQMSFDHWSVVPGDPTDSSIQLRPLEPAMGQSLARDLVLKT
RRRKGLSDSIAVSKYLEDETIIAISASGNADLLG |
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| NT seq |
2985 nt +upstreamnt +downstreamnt
atgtccacagaagattacgacgagtttggtaactatatcggaggtgatctcgactccgac
gatgagtccgacgtctccatttcccctgctgctcctccgcctgcggctcctggaccttca
gctgggccgtcagcgagctatgctcctcttgaaggtttcgatgaagacgaggcaatggaa
gatgaggaacccggcatggccatgcagctccacggcgtcgatggttcaacaggccaacaa
gtagtcctgcacgaggataaaaagtactacgccactgctgaggagacctacggtccggat
gttgaggcgttggtacaggaagaggatctgcaacctctttctgaacccattgtgcagccg
atcaaacaaaagtcatttaccgtacaggaaaagggattgcctgaaactcggtttgaccga
aactttatgattgatttgatggatcacccttcaatgatccgaaatgtcatggttgccgga
catatccatcatggaaaaacttcattgttagatatgctggtgtttgagacccacaaaatg
acttgggatgccgaccaacagactcgatatactgatacgcacatactctcgcgtgctcgc
ggtatttccgttaaatctggccctatgtctcttgttcttcaaaactctaaaggaaagtca
aatctcatcaatattatcgacactccaggtcacgccaacttcgttgacgaggtcgcctca
attgcccggcttaccgatggtgtggtcattgtggtggatgtggttgaaggtgtgatgcac
ggcaccgagcaagtgatccgtcacgcaatgcaggagaagttaaaaatggtgttggttgta
aacaagatggatagattgatcttggagttgcgtttaccgcctagcgaagctttcttcaaa
ataaagcacaccattgaagaagtcaactctatcattgcgtcaatcgatcctgatgactcc
ttccgtcattctcctgaaagaggcaacgtagcgttttcgtcaacgcagatgggttggtgt
tttaccctcaaaacattcgccaacatgtatgcggacacttttggctctttcgatatcgat
gagttttctctccgattatggggcaacatctactttgactcttccacccgaaagttcact
cgcaagcctgccgacgtcgagagcaagcgttcattcgtacactttattttggagcctttg
tacaaactctatactcaagtattgagtgcagaccaggaaacactgaaagaaacattggcc
gatttgcagatcacactcaaaccttcagtatacaagatggatgtcagacccctgttgaag
gtcgtgttggaggcattttttggcccatcagttggattgatagacatgatcacagaattt
ctaccttctcctcaaggaggcgctgaagcgaaaatacggcacacgtacaccggacctctc
acttctaaccttgccgattctatgatcagctgtgacccccaaggacccactgttgtacat
gtgaccaagctctaccatactgccgatgccgaacatttccgtgcttttggacgtgtcatg
agtggaactgtcaaagttggtcaagttgtcaaggtgctgggagaaggttactctttagaa
gacgaagaagatatgatcagtgccattgtggatggtattatgattgatgagtccagatat
aacgtggatattgaacgtgctcccgctggaaatcttgtcctcctatctggcgttgatgcg
tccatttccaagactgctacaatcgtctcaaaagatgttgatgacgatctctatatcttc
cgtcccataaagcacatgacagcttcagttctcaaggttgctgttgaacctgttgccccg
tccaacctaccaaaaatgcttgatggtctgcgaaaggtcaacaagtcataccctcttgtc
actaccaaggttgaggagagtggagagcacatcatcctcggtacaggagagctatacatg
gactctgtcttacatgatttaagaaagttattctcagaaatagagatcaaggtctcagat
cctgtcaccaagttctgtgaaacagtagtggaaacttctgctttgaaatgctacgccgaa
acgcccaacaagaagaataaactgaccatgatctccgaaccgctcgaggccgggattgcc
gccgacattgaggctggcagagtcagcatgaagatgaccaataaagaaagagggaagttc
tttgagagcaattaccaatgggatctgctggcttccaggaacatctgggcctttgggccg
gacgaaaatgggccgaacgcgttgattaatgacaccctgccctccgaggtggacagtaag
ctcttatcgagcgtcaaggaaagcgtgaagcagggcttccagtggggtacccgtgaagga
cctctatgtgacgaacccattcgcggtgtcaaattccgcattcttgatgcctctctcgca
caagaacctatctaccgagggggcggccaaattatcccaaccgctcgacgagtttgttac
tcctccttcctcctggccacccctcgtcttctcgaacctgtatactatgttgaggttcag
gctcctgccgattgcgtcgccgctgtgtacacagtcctctctcgccgacgtggccatgtc
actaaagacattcctaaacctggttctccgctctacaccgtcaaggcattcattcctgtg
ctcgacgcaaacggatttgaaactgatttgaggaccgcaacattgggtcaggcattctgt
caaatgagctttgaccactggagtgttgtgcctggagatcccactgacagcagcatacag
ctaagacctttggaaccggcgatgggacagagtttagctagggatttggtcctgaagacc
aggcgaaggaagggtttgagtgacagtatcgctgtgagcaaatacttggaagatgagacg
atcattgctatcagcgcatctggtaatgcagatttgttgggttag |
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