Cryptococcus deneoformans JEC21: CNG01500
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Entry
CNG01500 CDS
T00243
Name
(RefSeq) snRNP subunit, putative
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
cne
Cryptococcus deneoformans JEC21
Pathway
cne03008
Ribosome biogenesis in eukaryotes
cne03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CNG01500
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CNG01500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cne03041
]
CNG01500
03009 Ribosome biogenesis [BR:
cne03009
]
CNG01500
Spliceosome [BR:
cne03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
CNG01500
Ribosome biogenesis [BR:
cne03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
CNG01500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
PELOTA_1
Usp-48
Motif
Other DBs
NCBI-GeneID:
3258685
NCBI-ProteinID:
XP_571849
UniProt:
P0CQ52
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All DBs
Position
7:complement(join(434595..434621,434708..434954,435028..435077,435182..435241))
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AA seq
127 aa
AA seq
DB search
MSAQPNPKAFPLANAQLTNQILDLIQQAQHYKQLKKGANEATKTLNRGICEFIVMTADVE
PIEIVLHLPLLCEDKNVPYVFLPSKTALGRACGVSRPVIAASVTTNEARELNAQIQAVKN
EIEKLLI
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctcaacccaaccccaaggctttccctttggccaatgcccagctcaccaaccag
attctcgacttgatccagcaggctcagcattacaagcagctcaagaagggtgccaacgaa
gccaccaagacccttaaccgaggtatctgcgaattcattgtcatgaccgccgatgtcgag
cctattgagatcgtcctccaccttcccctcctctgtgaggacaagaacgtcccctatgtc
tttttgccttccaagactgctctcggtagggcttgcggtgtttctaggcctgttatcgcc
gccagtgttaccaccaatgaggctagggagttgaacgcccagatccaggctgtcaagaac
gagattgagaagctcctcatctaa
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