KEGG   Cryptococcus deneoformans JEC21: CNG03640
Entry
CNG03640          CDS       T00243                                 
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase, putative
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
cne  Cryptococcus deneoformans JEC21
Pathway
cne03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cne00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CNG03640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cne03400]
    CNG03640
Enzymes [BR:cne01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CNG03640
DNA repair and recombination proteins [BR:cne03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CNG03640
 Prokaryotic type
     CNG03640
SSDB
Motif
Pfam: HhH-GPD HHH TEX33
Other DBs
NCBI-GeneID: 3258636
NCBI-ProteinID: XP_572070
UniProt: Q5KDK4
LinkDB
Position
7:complement(join(1020693..1021248,1021306..1021640,1021690..1021732,1021787..1022211))
AA seq 452 aa
MSRRPNLRSTKLALNQKVSIIPTDAVKAEPPSSKLTYSSLRRPTRSSATVEELASPVKKN
KLNIAKYEYKGSIPSPRKRPRIDDVVKEEEIETKASPIKSPAKKPLPQVALAKPHAAPAK
WEEQYRLIEKMRRGIVAPVDDMGCERPRTNTEGDPKTFRFHILISLMLSSQTKDAVTSAA
VTSLHTSLPGGLSAASLAAAPLETIQECINKVGFWRRKAEYIQEAAKTLLEQEGDEKGDV
PKTVEGLCKLKGVGPKMAFLALQCAWDINAGIGVDVHVHRITNRLKWHRPPTSTPEQTRL
NLQSWLPPHLHKPINPLMVGFGQVICLPVGPRCDICLLGQKEICPSRVKGANAKGRKEVT
YSFKEEEDELAIGQWRWGQAKGVKSEAKVEIGYEGGLEKIKDEEPENSVEVEQMIKEPGM
RRPDEVLEVLDQVDGPTDIGAEPVIKTENVDW
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgtcgagaaggccaaatctccgctcaacaaagttagcactcaaccagaaggtctctatt
atcccaacagatgcggtcaaggcagagccgccaagctccaagcttacgtatagttccctc
cgtcgaccgaccagatcgagtgctacagtggaagaattggcatcgcccgtcaagaagaac
aaattaaacatcgccaagtacgaatacaagggctcgataccttcccctaggaagcgtccg
aggatagatgatgttgtcaaggaggaagaaattgaaacaaaggcaagcccaataaagtct
ccggcaaaaaaaccattgccacaggtagcgcttgcaaaacctcatgcggcccctgcaaaa
tgggaagaacagtaccgattgattgaaaagatgagacggggtattgtcgctcctgttgat
gatatgggctgcgaacggccgagaaccaataccgaaggagatccaaagacttttcgtttc
cacatcctcatatctctcatgctctcctctcaaacaaaagatgctgtgacctcagcagcc
gtcacctctcttcacacctctctgccaggtggtctttctgccgcctctctggccgctgca
cccttggaaaccatccaggaatgtatcaacaaggttggattctggcgacgaaaggcagaa
tacatccaagaggctgcaaagacacttttggaacaagaaggagatgagaaaggagacgtg
ccaaagacggtcgaaggtttgtgcaagttgaagggcgtagggcctaaaatggctttcttg
gccctgcaatgcgcttgggatattaatgctggaatcggagttgacgtccacgttcatcgc
atcacaaatcgcctcaaatggcaccgtccacctacatccaccccagaacaaacccgactc
aaccttcaatcatggcttcccccccatttacataaacctatcaaccccttgatggtcggt
tttggtcaagtgatctgcctcccagttgggcctaggtgcgatatctgtctgttaggccaa
aaggagatatgcccaagtcgagtaaaaggggcgaatgccaagggcagaaaagaggtgacg
tatagcttcaaggaagaggaggatgaacttgctatcgggcagtggcggtggggtcaagcg
aagggagttaagagtgaggccaaggttgagattggatatgagggaggattagagaaaatc
aaagatgaggaaccagagaattcggtcgaggtggagcagatgatcaaggaaccagggatg
agacgacctgatgaagtgttagaggtcttggatcaggtagatggccccacggatatcggg
gcagagcctgtcataaagaccgaaaatgtcgattggtaa

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