KEGG   Cryptococcus neoformans var. grubii H99: CNAG_00081
Entry
CNAG_00081        CDS       T08175                                 
Name
(RefSeq) pre-mRNA-processing factor 6
  KO
K12855  pre-mRNA-processing factor 6
Organism
cng  Cryptococcus neoformans var. grubii H99
Pathway
cng03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cng00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CNAG_00081
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cng03041]
    CNAG_00081
Spliceosome [BR:cng03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    CNAG_00081
 Complex C
   U5 SnRNP specific factors
    CNAG_00081
SSDB
Motif
Pfam: TPR_14 PRP1_N HAT_PRP39_N TPR_19 TPR_16 Suf HAT_PRP39_C HAT_Syf1_CNRKL1_N TPR_6 TPR_21 ANAPC3 FAT ARM_TT21 ARM_TT21_N ARM_TT21_2nd TPR_12 Cdc6_lid
Other DBs
NCBI-GeneID: 23883949
NCBI-ProteinID: XP_012046512
UniProt: J9VDV4
LinkDB
Position
1:complement(227600..230987)
AA seq 942 aa
MSNVGTVKHIPKEVRYNFLSMAAPASYVAGLGRGASGFTTRSDIGPARAGPSAEVVAEAQ
ARRGEEEIPDPDAFQDPDDERNLFAGTVYEADDEEADKVWDSVDARMDARRKARRDAAEA
KAAAEERARNPKLQTQFADLKRSLSSLNDADWDAIPEAGNLTGKRRKANLRLEENQNGRS
YNVSDTVIADAVKRNAMVGELDPAEAGIGIDGTETDLVSIGNARDRVLSLQLDQATRDAS
NGSSTSIDPKGYMTALNSQIVQTDAQIGDIKQARQLLQNLIQSNPKHAPGWIAAASLEVH
AKKMVAARKIIAEGCEKCPKNEDVWFHAAELNTPENAKVILGRAIQHVPQSVKIWLKAAS
LETDINAKKRVLRKALEFVPNSVGLWKETVNLEDDPEDARVLLTRAVEVIPNSVELWLTL
ARLETPENAKQVLNSARKRIPTSHEIWIAAGRLAEQSPSAVAVKPEVKMEDEAEYEAEQR
KKLAQQVNKLMAGAVNSLRKNQVILSREQWLQEAEKCEQDGSPLTAQAIVKATIAQDVEE
EDRRSVWIEDAERATKGGFYEVARACYAATLEAFPTTPSVWRKAAEFEKVHGTPDAVQEI
LAQGSQHCPHAEVLWLMAAKEKWVGGDIPGAQAILAEAFKQNEDSESIFLAAAKLAAETG
EMEAAIQILEKAKAQADTERVWMKSAVLLRQLGKLDEALSTLEVAIKRFASFDKLHMIRG
QIYESRNEVALARNAYAQGCRSCPKSIPLWILSARLEEKAGVTIKARALLEKARLHNPKN
DELWAESIKIEERTGSPQQAKSVLARAMQECPASPLLWSMAIFMEAPQQRKGRSVDAIKK
AGEHPAVILAVARNFWSERKIEKTRQWMANAITADEDWGDAWGYWLKFERQHGEKERQEA
VIEKCIVASPHHGPVWQSVSKDLANVGKSTKEILELVADKLE
NT seq 2829 nt   +upstreamnt  +downstreamnt
atgtcaaacgtaggcacagtgaagcacatcccaaaggaagtgcgatacaacttcctcagc
atggccgctccggcgagctatgttgctggtctcggtcgaggtgcttctggtttcacaact
cggtccgatattggtcccgcccgagctggtcccagtgcagaagttgttgcagaagctcaa
gctcgccgtggtgaagaagaaatccctgatccagatgctttccaagatccggatgacgaa
aggaatttgtttgctggtacagtctacgaagcggatgacgaagaagccgacaaggtgtgg
gacagtgttgatgccagaatggatgcgagaagaaaggccagacgagatgcggcagaagcg
aaagcggcggctgaagaacgcgctcgcaatcccaagcttcaaacacaatttgcagacttg
aaacgatccctctcgagtctcaacgatgcagactgggatgccatccctgaagcaggaaac
ttgactggaaaaaggaggaaggccaacttgagattggaggaaaatcagaatggaagaagc
tacaatgtcagcgacaccgtcattgcggatgctgtgaagagaaatgccatggtaggagag
ttggatcctgcagaggctggtatcggtatcgatggtaccgaaacagatcttgtatctatc
ggtaatgccagagaccgagtattatccctgcagcttgaccaagctacaagagatgcctca
aacggctcttctaccagcatcgaccctaagggctatatgaccgctcttaacagtcagatt
gttcaaacggacgctcaaatcggtgatattaagcaagctcgccagctcttgcaaaacctc
attcagtctaatcccaaacacgccccagggtggatcgccgccgcttccttggaagtacac
gctaagaagatggtcgctgccaggaagattatcgctgaaggatgtgagaagtgtccgaaa
aacgaggatgtttggttccatgccgcggaactcaacacaccggagaacgcgaaagttatc
ttgggtcgagctatacagcacgttcctcaatctgtcaaaatttggctcaaggctgcttct
ctagaaacagacataaatgccaagaagcgcgttctccgaaaagcccttgaattcgttcct
aactcagtggggttgtggaaagagactgtcaacctcgaagacgatcctgaagacgcccgc
gttctccttacccgtgctgtcgaagtcatccccaactctgtggagctctggctcactttg
gcccgtcttgaaacacctgagaacgccaagcaggtactcaattctgcgcgcaagcgtatc
cctacctctcacgaaatttggatcgctgccggtaggcttgctgaacagtcaccttccgct
gtggctgtcaagccagaggtcaagatggaggatgaagcagagtacgaggcagagcaaagg
aagaagcttgctcagcaggtcaacaaactcatggctggtgctgtcaattcattgcgcaag
aaccaggtcattctttcgcgagaacagtggttgcaagaggccgagaaatgcgaacaggac
ggttcacctcttacagcacaagctattgtgaaggcaactatcgctcaggacgtcgaagaa
gaagacaggcgatctgtttggattgaagatgcggagagagcaacaaagggtggattctac
gaggtcgcgagggcttgttacgctgccactctcgaggcttttcctactactccatcagtc
tggaggaaagctgcggagttcgaaaaggttcacggcacacccgacgctgtccaagaaatt
ctcgcccagggatcccaacattgtccccatgcggaggtcctctggcttatggccgcgaaa
gagaagtgggtcggcggcgatatccccggtgctcaagccatccttgccgaagctttcaag
caaaatgaagattccgaatctatcttccttgctgcggccaagctagcagccgaaaccggg
gagatggaggctgctatccagatccttgagaaggccaaggcgcaggcagacacagagagg
gtctggatgaagtcagcggtactgttgaggcagttgggcaagttggacgaggctctttca
actttggaggttgctatcaagaggttcgcttccttcgacaagttgcacatgatccgaggg
cagatctacgagtcccgtaatgaggttgcgcttgcgcgaaatgcatatgctcaaggatgc
cgatcatgtccgaagagtatcccattatggatcttatcggcccggctggaggagaaggca
ggtgtgacgatcaaggcaagggcactgctcgaaaaggcgaggttgcataatcccaagaat
gatgaattatgggcggaaagtatcaagattgaggagcgaacgggcagccctcaacaagca
aaatctgtccttgctcgagcaatgcaagaatgccccgcctctccacttctttggtccatg
gccatcttcatggaggctcctcaacagcgaaaaggtcgttccgtcgacgccatcaaaaag
gccggcgagcatccagccgtcattttggcggtcgcgaggaacttctggagtgaaaggaag
attgaaaagacgagacaatggatggccaatgctattaccgccgatgaagactggggagat
gcttggggttattggctgaagtttgaaaggcagcatggagagaaagaacgtcaagaagcg
gtcattgagaagtgcatcgtggcgtcaccacaccatggtccggtgtggcagtcggtatca
aaggatttggccaatgttggcaagtctacaaaagagatactagagttggtcgcggacaaa
ctggaataa

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