Cryptococcus neoformans var. grubii H99: CNAG_00241
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Entry
CNAG_00241 CDS
T08175
Name
(RefSeq) protein AIR1/2
KO
K12597
protein AIR1/2
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNAG_00241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cng03019
]
CNAG_00241
03016 Transfer RNA biogenesis [BR:
cng03016
]
CNAG_00241
Messenger RNA biogenesis [BR:
cng03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
CNAG_00241
Transfer RNA biogenesis [BR:
cng03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
CNAG_00241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_4
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
23884067
NCBI-ProteinID:
XP_012046220
UniProt:
J9VL28
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All DBs
Position
1:634697..637755
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AA seq
653 aa
AA seq
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MAHYVPTSFKPMRSLVAAAGIQLSPPPPSDYNEGTFETEDGELLLGNIIIDEFPADGDRP
AVQGEHFQPPGLFNTSMMPTIVTTDGKLHVELKTKDDKATVSEKDQGEGLMLPQHVLLET
SSAVQDAEDGGDDEGEGDHSLGGDDFLEGLHFVDDDITRGSRRYFNPEPEDNMEVEATFL
ATADSRKVCQNCKRPGHQAAKCPHIICTTCGAMDEHERRDCPLSKVCYGCGRRGHHKSEC
PDPISRNKRWAGCERCGSREHTDKNCPTLWRIYTYRSDSGRRDTIKLKEKAEGWVKEAIG
GDAMEDWCYNCARTGHFGDDCPQRRGSLVRLTAPSAFSREIARRGPFFSAPKSSLPTPTH
SRWEDDDDPSAIPYTSAYDSFAGSNAGRRGREKEKQRMMARDTDFNDEDDWFSGDRNRNI
GKGAGTPRNNPRGGRSGKRPWDSEIRGREWDRDRYDRERASREFFDRDREPPRSRGQAPS
RRRSRSPNRRDGSRVNAVQEAAPNSAPPKAVYKPAINIRDRAMDSPSVREGEPGAKAGSK
TLVSRALSGQNSNNSTPRGRRSSNSPSALPSLLSRIESPTPSNSTSRNRKGRGKEQERDW
ENEWRRRGNGGGNVVNWGKDLDKETEGLTMKKKTKQDGISKGSSGQKYYGGYM
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcgcattacgttccaacctcattcaagcctatgcggtctttggtggcggcagcaggt
atacaattatctccgcctcctccttcggattacaatgaggggacattcgaaaccgaagat
ggggagctgctcttgggtaacatcatcatagatgagttcccagcagatggtgaccgtcca
gctgtccaaggtgaacattttcaaccgcctgggctattcaacacttctatgatgccgacg
atcgtcaccacggacggcaagttgcatgtggaactcaagacaaaagatgacaaggcaacc
gtctccgagaaagatcaaggagaagggctgatgttacctcaacatgtactattggagact
tcttcggctgtgcaagacgctgaagatggtggtgatgacgagggagaaggagatcactcg
ttagggggggatgatttcttggaaggtcttcactttgttgatgatgatattaccagaggt
tcaagaagatactttaatcctgagcccgaggataatatggaagtagaagcgaccttcctt
gcgacagcggattccagaaaggtctgtcaaaactgcaagcgcccaggtcatcaagctgca
aaatgcccccatatcatttgtacaacctgtggagccatggacgagcatgagcgtcgcgat
tgtccgctcagcaaagtttgctatggatgcggtcgacgaggtcatcacaaatccgaatgt
ccagaccccatttccagaaataagcgatgggcaggttgtgaacgatgcggaagtagagaa
catacagacaaaaactgccctaccctgtggaggatttacacttatcgctcagattccggc
cggcgtgacacgatcaagctgaaagaaaaagccgaaggatgggtgaaggaggccatcggc
ggcgacgcaatggaagattggtgctacaactgtgctagaacaggccactttggtgatgac
tgcccccaacgccgtggttctctagttcgacttacggctccttcggcattttcgcgagaa
atcgcccggcgcgggccattcttctctgctccaaaatcttccttacctactcccactcac
tctcgatgggaagatgacgacgatccttcggccataccgtataccagtgcttatgactcg
tttgctggatccaatgctggtcgtagagggcgagaaaaggagaagcaacggatgatggca
cgtgataccgattttaatgatgaagacgattggttcagtggtgaccgaaatcgcaatatt
ggaaagggcgccggcacgccacgaaacaatccacgaggaggaaggagtggaaagcgtcct
tgggattcagaaatacgagggagggaatgggatagggacagatacgaccgtgaacgggct
tctcgagaattctttgatcgagatcgtgaaccccctcgctctcgtggacaagctccttct
agacgtcgatctcgttcgcctaatcgccgagacggctctcgtgtcaatgcagtccaagag
gctgcacctaactctgctccacccaaagcagtttacaaacccgcgatcaacatacgagac
cgggcgatggactccccttctgtacgcgaaggtgaacccggagcaaaagcgggatcgaaa
accttagtgtctcgcgccttaagcggtcagaatagtaataatagtacacctcgtggccga
aggtcttccaattcgccttcggcccttccatccttgctgagtcgaattgaatcacccact
ccttcaaactctacttcgcgtaacaggaaaggtcgcgggaaagaacaagaacgggattgg
gagaacgagtggagaagacgcggaaacggcggcgggaacgtggttaattggggaaaggat
cttgacaaggaaactgaggggttgaccatgaagaagaagacaaagcaagacggtataagt
aagggaagtagcgggcagaaatattacggcggttatatgtaa
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